BLASTX nr result
ID: Coptis24_contig00010859
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010859 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36205.1| unknown [Lotus japonicus] 207 7e-52 ref|XP_003517668.1| PREDICTED: signal recognition particle recep... 206 2e-51 ref|XP_003517667.1| PREDICTED: signal recognition particle recep... 206 2e-51 gb|ACJ84671.1| unknown [Medicago truncatula] 206 2e-51 ref|XP_003607043.1| Signal recognition particle receptor subunit... 206 2e-51 >gb|AFK36205.1| unknown [Lotus japonicus] Length = 259 Score = 207 bits (527), Expect = 7e-52 Identities = 96/111 (86%), Positives = 107/111 (96%) Frame = -1 Query: 335 FYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTKLDEYLPQ 156 FYQLRDGS+HQGTVTSM+PNEGTF+LHSE+ K GK+KPVH++DVPGHSRLR KLDEYLPQ Sbjct: 72 FYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSRLRPKLDEYLPQ 131 Query: 155 AAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVT 3 AAG+VFVVDA+DFLPNCR A+EYLYDILTKGSVVKKKIP+LILCNKTDKVT Sbjct: 132 AAGVVFVVDAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVT 182 >ref|XP_003517668.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform 2 [Glycine max] Length = 260 Score = 206 bits (524), Expect = 2e-51 Identities = 96/111 (86%), Positives = 106/111 (95%) Frame = -1 Query: 335 FYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTKLDEYLPQ 156 FYQLRDGS+HQGTVTSM+PNEGTF+LH+E + GKIKPVHV+DVPGHSRLR KLDEYLPQ Sbjct: 73 FYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSRLRPKLDEYLPQ 132 Query: 155 AAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVT 3 AAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIPVLILCNKTDKVT Sbjct: 133 AAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDKVT 183 >ref|XP_003517667.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform 1 [Glycine max] Length = 259 Score = 206 bits (524), Expect = 2e-51 Identities = 96/111 (86%), Positives = 106/111 (95%) Frame = -1 Query: 335 FYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTKLDEYLPQ 156 FYQLRDGS+HQGTVTSM+PNEGTF+LH+E + GKIKPVHV+DVPGHSRLR KLDEYLPQ Sbjct: 72 FYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSRLRPKLDEYLPQ 131 Query: 155 AAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVT 3 AAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIPVLILCNKTDKVT Sbjct: 132 AAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDKVT 182 >gb|ACJ84671.1| unknown [Medicago truncatula] Length = 260 Score = 206 bits (523), Expect = 2e-51 Identities = 95/111 (85%), Positives = 107/111 (96%) Frame = -1 Query: 335 FYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTKLDEYLPQ 156 FYQLRDGS+HQGTVTSM+PNEGTF+LH E+AK GKIKPVH++DVPGHSRLR KLDE+LPQ Sbjct: 73 FYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHSRLRPKLDEFLPQ 132 Query: 155 AAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVT 3 AAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDKVT Sbjct: 133 AAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVT 183 >ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago truncatula] gi|355508098|gb|AES89240.1| Signal recognition particle receptor subunit beta [Medicago truncatula] Length = 260 Score = 206 bits (523), Expect = 2e-51 Identities = 95/111 (85%), Positives = 107/111 (96%) Frame = -1 Query: 335 FYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTKLDEYLPQ 156 FYQLRDGS+HQGTVTSM+PNEGTF+LH E+AK GKIKPVH++DVPGHSRLR KLDE+LPQ Sbjct: 73 FYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHSRLRPKLDEFLPQ 132 Query: 155 AAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVT 3 AAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDKVT Sbjct: 133 AAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVT 183