BLASTX nr result

ID: Coptis24_contig00010856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010856
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK82608.1| ethylene-responsive element binding protein 1 [He...    86   2e-14
ref|XP_002509442.1| Ethylene-responsive transcription factor, pu...    83   9e-14
gb|ADE41111.1| AP2 domain class transcription factor [Malus x do...    79   1e-12
ref|XP_003543229.1| PREDICTED: ethylene-responsive transcription...    78   3e-12
gb|ADE41118.1| AP2 domain class transcription factor [Malus x do...    77   5e-12

>gb|AEK82608.1| ethylene-responsive element binding protein 1 [Hevea brasiliensis]
          Length = 243

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 68/229 (29%), Positives = 89/229 (38%), Gaps = 16/229 (6%)
 Frame = +2

Query: 2   WGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPPENL--EIF 175
           WGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP   EN+   I 
Sbjct: 34  WGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPPADENVNKNII 93

Query: 176 NNKINNA---XXXXXXXXXXXXXXREXXXXXXXXXXXXXMNRG-NGAVRFPFNQIPLTHQ 343
            NK N+                  RE             +N G + AVRFPF  +P    
Sbjct: 94  VNKKNDTGANNHSPSPSSTVESSSRETPALMMESSSPLDLNLGRSAAVRFPFQPVPAVGG 153

Query: 344 LXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXXXXXXARFDPVGINYSHNQQF 523
           +                 +F+FDA+++S+                 +  +  ++ + +Q 
Sbjct: 154 VFTAPVGNHQR-------VFYFDAMVKSQ-----------------YQRLLFDHQNKRQH 189

Query: 524 YHHXXXXXXXXXXXXXXXXFN----------HHTSPPRRVLDLDLNFPP 640
            H                  +          H  +PPR+ LD DLN PP
Sbjct: 190 LHDQAMSTAGNGGGGGVQSDSDSSSVVDLNQHEINPPRKSLDFDLNLPP 238


>ref|XP_002509442.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223549341|gb|EEF50829.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 255

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 70/231 (30%), Positives = 84/231 (36%), Gaps = 19/231 (8%)
 Frame = +2

Query: 2   WGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPPENL--EIF 175
           WGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP   EN+   IF
Sbjct: 36  WGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPLACENVNKNIF 95

Query: 176 ---------------NNKINNAXXXXXXXXXXXXXXREXXXXXXXXXXXXXMNRG-NGAV 307
                          NN  NN+              RE             +N G + AV
Sbjct: 96  LSKQNDTTKVNAIANNNNNNNSNQSPSPSSTVESSSRETPALTMESSSPLDLNLGPSSAV 155

Query: 308 RFPFNQIPLTHQLXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXXXXXXARFD 487
           RFPF  +P                      + +FDA+++S+                 FD
Sbjct: 156 RFPFQAVP-----GLGGVFTAPVVNHHQQHVLYFDAMVKSQ------------YERLLFD 198

Query: 488 PVGINYSHNQ-QFYHHXXXXXXXXXXXXXXXXFNHHTSPPRRVLDLDLNFP 637
           P    + H Q   +                   N   +PP R  D DLN P
Sbjct: 199 PHQQRHQHQQAMMFGGGGVQSDSDSSSVVDLNQNEINNPPPRSFDFDLNLP 249


>gb|ADE41111.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 247

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 39/64 (60%), Positives = 41/64 (64%)
 Frame = +2

Query: 2   WGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPPENLEIFNN 181
           WGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP P EN+ +   
Sbjct: 33  WGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAIEFRGAKAKTNFPQPSENVTLNVT 92

Query: 182 KINN 193
           K NN
Sbjct: 93  KNNN 96


>ref|XP_003543229.1| PREDICTED: ethylene-responsive transcription factor 4-like [Glycine
           max]
          Length = 193

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 40/63 (63%), Positives = 42/63 (66%)
 Frame = +2

Query: 2   WGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPPENLEIFNN 181
           WGRYAAEIRDPGKK+RVWLGTFDT                GAKAKTNFPTP E L + NN
Sbjct: 35  WGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGAKAKTNFPTPSE-LILNNN 93

Query: 182 KIN 190
            IN
Sbjct: 94  NIN 96


>gb|ADE41118.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 272

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 40/67 (59%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = +2

Query: 2   WGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPPENLEIF-- 175
           WGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP   EN+ +   
Sbjct: 32  WGRYAAEIRDPGKKSRVWLGTFDTAEEAALAYDNAARDFRGAKAKTNFPLLSENVSLSIT 91

Query: 176 -NNKINN 193
            NN INN
Sbjct: 92  KNNNINN 98


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