BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010845
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_002328386.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002328377.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/76 (52%), Positives = 55/76 (72%)
 Frame = +3

Query: 6   CLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISP 185
           CLCK  RV DA +L+ EM+ KG+ P+  T+N+LI+G C +  LK A SL  +M  ++I+P
Sbjct: 242 CLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINP 301

Query: 186 NVVTFNILVDALGNEG 233
           +V TFNIL+DALG EG
Sbjct: 302 DVYTFNILIDALGKEG 317



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 52/77 (67%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D L K+ ++++A++LF+EM  K + P+ +T+ SLI GLC    L+ AI+L + M ++ I 
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370

Query: 183 PNVVTFNILVDALGNEG 233
           P+V ++ IL+DAL   G
Sbjct: 371 PDVYSYTILLDALCKGG 387


>ref|XP_002328386.1| predicted protein [Populus trichocarpa] gi|222838101|gb|EEE76466.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK   VN+AV    EMVD+G+ PD +T+N+++HG CS+ QL  A  LF++M  R++ 
Sbjct: 244 DSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303

Query: 183 PNVVTFNILVDALGNEG 233
           P+ VTFNILVD L  EG
Sbjct: 304 PDTVTFNILVDGLCKEG 320



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/77 (40%), Positives = 51/77 (66%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           +CLC+   V+ AV++  +M   G+ PDAITFN+LI+GLC+  ++K A+ LF +M      
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198

Query: 183 PNVVTFNILVDALGNEG 233
           PNV+++N +++ L   G
Sbjct: 199 PNVISYNTVINGLCKNG 215



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/74 (33%), Positives = 48/74 (64%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           CK  R+N+A  L  EM +K + PD +T+++L+ GLC + + + A++LF++M    + P++
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446

Query: 192 VTFNILVDALGNEG 233
           + ++IL+D     G
Sbjct: 447 MAYSILLDGFCKHG 460



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LC + ++ +AV LF EMV  G  P+ I++N++I+GLC       A+ +F  M +    PN
Sbjct: 176 LCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPN 235

Query: 189 VVTFNILVDAL 221
           VVT+N ++D+L
Sbjct: 236 VVTYNTIIDSL 246



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C   ++N+A  LF+EMV + V+PD +TFN L+ GLC    +  A  + E M+++   PN 
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 192 VTFNILVD 215
            T+N L+D
Sbjct: 342 YTYNALMD 349



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LC+  R  +A+NLF+EM   G++PD + ++ L+ G C    L  A+ L ++M +R I PN
Sbjct: 421 LCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPN 480

Query: 189 VVTFNILV 212
           ++ + IL+
Sbjct: 481 IILYTILI 488


>ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/77 (50%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK  R N+A+  F EMVD+G+ P+ +T++S++HG C++ QL  A SLF+ M  R++ 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 183 PNVVTFNILVDALGNEG 233
           PN VTF ILVD L  EG
Sbjct: 279 PNTVTFTILVDGLCKEG 295



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/74 (35%), Positives = 45/74 (60%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           CK  R+N+A  L  EM D+ + PD +T+++L+ G C   + + A  LF++M    + P+ 
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421

Query: 192 VTFNILVDALGNEG 233
           +T++IL+D L   G
Sbjct: 422 ITYSILLDGLCKHG 435



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LC + ++ DAV LF E+   G  P  IT+ ++I GLC I     A+ L + M ++   P+
Sbjct: 151 LCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 189 VVTFNILVDAL 221
           VV +N ++D+L
Sbjct: 211 VVAYNTVIDSL 221



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/75 (34%), Positives = 43/75 (57%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LCK     +A+ L ++M +KG  PD + +N++I  LC  R+   A+  F +M  + I PN
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 189 VVTFNILVDALGNEG 233
           VVT++ ++    N G
Sbjct: 246 VVTYSSILHGFCNLG 260



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/77 (32%), Positives = 44/77 (57%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK   +++A  L + M +  + P    +N LI G+C+  +L+ A  LF ++  + I 
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 183 PNVVTFNILVDALGNEG 233
           P+VVT+ +++  L  EG
Sbjct: 489 PSVVTYTVMISGLLKEG 505



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/74 (36%), Positives = 42/74 (56%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C+  R   A  LF+EM   G++PD+IT++ L+ GLC    L  A  L + M +  I P++
Sbjct: 397 CQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHI 456

Query: 192 VTFNILVDALGNEG 233
             +NIL+  + N G
Sbjct: 457 CIYNILIQGMCNFG 470



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK+  + +A  +F+ M + GV PDA T+++L+ G C   Q+  A  LF+ M  +  +
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348

Query: 183 PNVVTFNILVD 215
           P+V  +NIL++
Sbjct: 349 PSVRVYNILIN 359


>ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|222838091|gb|EEE76456.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/77 (50%), Positives = 53/77 (68%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK   VNDA++L  EMVD+G+ PD +T+++++HG CS+  L  A  LF +M  R++ 
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299

Query: 183 PNVVTFNILVDALGNEG 233
           PN VTF ILVD L  EG
Sbjct: 300 PNTVTFTILVDGLCKEG 316



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/71 (38%), Positives = 47/71 (66%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LC+  R  +A+NLF+EM   G++PD +T+++L+ GLC    L  A+ L + M +  I P+
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 189 VVTFNILVDAL 221
           +V +NIL++ +
Sbjct: 477 IVLYNILIEGM 487



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/77 (36%), Positives = 50/77 (64%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           +CLC+   V  A+++  +M   G+ PDAITFN+LI+G C   ++K A+ LF +M +R   
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194

Query: 183 PNVVTFNILVDALGNEG 233
           P+V++++ +++ L   G
Sbjct: 195 PDVISYSTVINGLCKSG 211



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/74 (33%), Positives = 51/74 (68%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           CK+ R+++A +L  EM +K + PD +T+++L+ GLC + + + A++LF++M    + P++
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442

Query: 192 VTFNILVDALGNEG 233
           +T++ L+D L   G
Sbjct: 443 MTYSTLLDGLCKHG 456



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C    +N+A  LF EMV + V+P+ +TF  L+ GLC    +  A  +FE M+K+   PN 
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337

Query: 192 VTFNILVD 215
            T+N L+D
Sbjct: 338 YTYNALMD 345



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/70 (34%), Positives = 42/70 (60%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C +  + +AV LF EMV +G  PD I+++++I+GLC       A+ L   M ++   PN+
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232

Query: 192 VTFNILVDAL 221
           V +  ++D+L
Sbjct: 233 VAYTTIIDSL 242


>ref|XP_002328377.1| predicted protein [Populus trichocarpa] gi|222838092|gb|EEE76457.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/77 (48%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK   VNDA+    EMVD+G+ P+A+T+++++HG C++ QL  A  LF++M  R++ 
Sbjct: 381 DSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVM 440

Query: 183 PNVVTFNILVDALGNEG 233
           PN +TF+ILVD L  EG
Sbjct: 441 PNTLTFSILVDGLCQEG 457



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/73 (50%), Positives = 52/73 (71%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D LCK   VNDA++   EMV +G+ PDAIT+NS++HGLC + QL  A  LF+ M +    
Sbjct: 241 DSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300

Query: 183 PNVVTFNILVDAL 221
           P+VVT+NI++D+L
Sbjct: 301 PDVVTYNIIIDSL 313



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/73 (43%), Positives = 49/73 (67%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           D L K   VNDA +   EMVD+G+ PD +T+ +++HGLC + QL  AI LF+ M ++   
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370

Query: 183 PNVVTFNILVDAL 221
           P+VV +N ++D+L
Sbjct: 371 PDVVAYNTIIDSL 383



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/77 (36%), Positives = 52/77 (67%)
 Frame = +3

Query: 3   DCLCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSIS 182
           +CLC+   V+ AV+++ +M   G+ PD ITF +LI+G+C+  ++K A+ L+ +M +    
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 183 PNVVTFNILVDALGNEG 233
           P+V+++N L++ L N G
Sbjct: 196 PDVISYNTLINGLCNSG 212



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           +C + ++  AV L+ EMV  G  PD I++N+LI+GLC+      A+ +F+ M +    PN
Sbjct: 173 VCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPN 232

Query: 189 VVTFNILVDAL 221
           VVT+N ++D+L
Sbjct: 233 VVTYNTIIDSL 243



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%)
 Frame = +3

Query: 9   LCKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPN 188
           LC   ++N+A+ LF++M  KG  PD + +N++I  LC  R +  A+    +M  R I PN
Sbjct: 348 LCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPN 407

Query: 189 VVTFNILVDALGNEG 233
            VT++ ++    N G
Sbjct: 408 AVTYSTILHGFCNLG 422



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/70 (37%), Positives = 45/70 (64%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C + ++N+A  +F+ MV KG  PD  ++N LI+G C+ R++  A +L   MS + ++PN 
Sbjct: 489 CLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNT 548

Query: 192 VTFNILVDAL 221
           VT+N ++  L
Sbjct: 549 VTYNTIMKGL 558



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 45/68 (66%)
 Frame = +3

Query: 12  CKQYRVNDAVNLFQEMVDKGVVPDAITFNSLIHGLCSIRQLKGAISLFEDMSKRSISPNV 191
           C   ++++A  LF+EMV + V+P+ +TF+ L+ GLC    +  A  +FE M+++ + PN+
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478

Query: 192 VTFNILVD 215
            T+N L++
Sbjct: 479 YTYNALMN 486