BLASTX nr result

ID: Coptis24_contig00010843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010843
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330103.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002514716.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002330103.1| predicted protein [Populus trichocarpa] gi|222871237|gb|EEF08368.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +2

Query: 224 LHLQEESTLVKIDIRCRVQGDVVLKCIHLDE 316
           L+ QEE TLVKIDIRCR+QGDVVL+CIHLDE
Sbjct: 196 LYQQEECTLVKIDIRCRIQGDVVLECIHLDE 226


>ref|XP_002514716.1| conserved hypothetical protein [Ricinus communis]
           gi|223546320|gb|EEF47822.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1550

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +2

Query: 227 HLQEESTLVKIDIRCRVQGDVVLKCIHLDE 316
           +LQEE  LVKID+RCRVQGDVV++CIHLDE
Sbjct: 257 YLQEECMLVKIDVRCRVQGDVVIECIHLDE 286


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