BLASTX nr result

ID: Coptis24_contig00010830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010830
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]      99   3e-19
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]      99   4e-19
ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat...    98   6e-19
ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat...    98   6e-19
ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/51 (88%), Positives = 51/51 (100%)
 Frame = +2

Query: 2   EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154
           EPD+IISSN+AGFIY+TDIDIQRKKITYLAPSAGELPSKYL++G+LTWLET
Sbjct: 382 EPDEIISSNVAGFIYVTDIDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 432


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/51 (86%), Positives = 51/51 (100%)
 Frame = +2

Query: 2   EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154
           EPD+IISSN+AGFIY+TD+DIQRKKITYLAPSAGELPSKYL++G+LTWLET
Sbjct: 388 EPDEIISSNVAGFIYVTDVDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 438


>ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/51 (86%), Positives = 50/51 (98%)
 Frame = +2

Query: 2   EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154
           EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP KYL+VGTLTW+ET
Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


>ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/51 (86%), Positives = 50/51 (98%)
 Frame = +2

Query: 2   EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154
           EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP KYL+VGTLTW+ET
Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


>ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/51 (86%), Positives = 51/51 (100%)
 Frame = +2

Query: 2   EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154
           EPDQI+SSNIAGFIY+TDID+QR+KITYL+P+AGELPSKYLV+GTLTWLET
Sbjct: 387 EPDQIVSSNIAGFIYVTDIDLQRRKITYLSPTAGELPSKYLVMGTLTWLET 437


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