BLASTX nr result
ID: Coptis24_contig00010830
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010830 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max] 99 3e-19 ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] 99 4e-19 ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat... 98 6e-19 ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat... 98 6e-19 ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2... 98 6e-19 >ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max] Length = 432 Score = 99.4 bits (246), Expect = 3e-19 Identities = 45/51 (88%), Positives = 51/51 (100%) Frame = +2 Query: 2 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154 EPD+IISSN+AGFIY+TDIDIQRKKITYLAPSAGELPSKYL++G+LTWLET Sbjct: 382 EPDEIISSNVAGFIYVTDIDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 432 >ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] Length = 438 Score = 99.0 bits (245), Expect = 4e-19 Identities = 44/51 (86%), Positives = 51/51 (100%) Frame = +2 Query: 2 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154 EPD+IISSN+AGFIY+TD+DIQRKKITYLAPSAGELPSKYL++G+LTWLET Sbjct: 388 EPDEIISSNVAGFIYVTDVDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 438 >ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus] Length = 438 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/51 (86%), Positives = 50/51 (98%) Frame = +2 Query: 2 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154 EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP KYL+VGTLTW+ET Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438 >ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus] Length = 438 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/51 (86%), Positives = 50/51 (98%) Frame = +2 Query: 2 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154 EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP KYL+VGTLTW+ET Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438 >ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1| predicted protein [Populus trichocarpa] Length = 437 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/51 (86%), Positives = 51/51 (100%) Frame = +2 Query: 2 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKYLVVGTLTWLET 154 EPDQI+SSNIAGFIY+TDID+QR+KITYL+P+AGELPSKYLV+GTLTWLET Sbjct: 387 EPDQIVSSNIAGFIYVTDIDLQRRKITYLSPTAGELPSKYLVMGTLTWLET 437