BLASTX nr result

ID: Coptis24_contig00010829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010829
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]      98   8e-19
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]      97   1e-18
ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat...    96   2e-18
ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat...    96   2e-18

>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/51 (86%), Positives = 51/51 (100%)
 Frame = -2

Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182
           EPD+IISSN+AGFIY+TDIDIQRKKITYLAPSAGELPSK+L++G+LTWLET
Sbjct: 382 EPDEIISSNVAGFIYVTDIDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 432


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/51 (84%), Positives = 51/51 (100%)
 Frame = -2

Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182
           EPD+IISSN+AGFIY+TD+DIQRKKITYLAPSAGELPSK+L++G+LTWLET
Sbjct: 388 EPDEIISSNVAGFIYVTDVDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 438


>ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/51 (84%), Positives = 51/51 (100%)
 Frame = -2

Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182
           EPDQI+SSNIAGFIY+TDID+QR+KITYL+P+AGELPSK+LV+GTLTWLET
Sbjct: 387 EPDQIVSSNIAGFIYVTDIDLQRRKITYLSPTAGELPSKYLVMGTLTWLET 437


>ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/51 (82%), Positives = 50/51 (98%)
 Frame = -2

Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182
           EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET
Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


>ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/51 (82%), Positives = 50/51 (98%)
 Frame = -2

Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182
           EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET
Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


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