BLASTX nr result
ID: Coptis24_contig00010829
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010829 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max] 98 8e-19 ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] 97 1e-18 ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat... 96 2e-18 ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat... 96 2e-18 >ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max] Length = 432 Score = 97.8 bits (242), Expect = 8e-19 Identities = 44/51 (86%), Positives = 51/51 (100%) Frame = -2 Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182 EPD+IISSN+AGFIY+TDIDIQRKKITYLAPSAGELPSK+L++G+LTWLET Sbjct: 382 EPDEIISSNVAGFIYVTDIDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 432 >ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] Length = 438 Score = 97.4 bits (241), Expect = 1e-18 Identities = 43/51 (84%), Positives = 51/51 (100%) Frame = -2 Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182 EPD+IISSN+AGFIY+TD+DIQRKKITYLAPSAGELPSK+L++G+LTWLET Sbjct: 388 EPDEIISSNVAGFIYVTDVDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 438 >ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1| predicted protein [Populus trichocarpa] Length = 437 Score = 96.7 bits (239), Expect = 2e-18 Identities = 43/51 (84%), Positives = 51/51 (100%) Frame = -2 Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182 EPDQI+SSNIAGFIY+TDID+QR+KITYL+P+AGELPSK+LV+GTLTWLET Sbjct: 387 EPDQIVSSNIAGFIYVTDIDLQRRKITYLSPTAGELPSKYLVMGTLTWLET 437 >ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus] Length = 438 Score = 96.3 bits (238), Expect = 2e-18 Identities = 42/51 (82%), Positives = 50/51 (98%) Frame = -2 Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182 EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438 >ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus] Length = 438 Score = 96.3 bits (238), Expect = 2e-18 Identities = 42/51 (82%), Positives = 50/51 (98%) Frame = -2 Query: 334 EPDQIISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 182 EP++IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET Sbjct: 388 EPEEIISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438