BLASTX nr result

ID: Coptis24_contig00010823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010823
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792...   110   9e-23
ref|XP_002888593.1| meiotic asynaptic mutant 1 [Arabidopsis lyra...   109   3e-22
ref|XP_002514918.1| protein with unknown function [Ricinus commu...   109   3e-22
ref|XP_003601788.1| HORMA domain-containing protein [Medicago tr...   107   1e-21
ref|XP_003537535.1| PREDICTED: uncharacterized protein LOC100790...   105   3e-21

>ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792473 [Glycine max]
          Length = 662

 Score =  110 bits (276), Expect = 9e-23
 Identities = 71/130 (54%), Positives = 76/130 (58%), Gaps = 18/130 (13%)
 Frame = +3

Query: 168 LMTRNFLRIAIFNISYIRGLFP--------VPALEMKIKKL----------IDWMEKGVY 293
           L+TRN LRIAIFNISYIRGLFP        VPALEMKIKKL          IDWMEKGVY
Sbjct: 33  LLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVY 92

Query: 294 DALQNKYLKTLLFCVCQFVKQ*KDQ*LRNMLVS*ISREYIMRK*S*SGKLCLFAVSFSYS 473
           DALQ KYLKTLLFCVC+ V               +  EY              A SFSYS
Sbjct: 93  DALQKKYLKTLLFCVCEAVD------------GPMIEEY--------------AFSFSYS 126

Query: 474 NSDSQQVMMN 503
           NSD+Q+V MN
Sbjct: 127 NSDNQEVSMN 136


>ref|XP_002888593.1| meiotic asynaptic mutant 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297334434|gb|EFH64852.1| meiotic asynaptic mutant 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score =  109 bits (272), Expect = 3e-22
 Identities = 69/130 (53%), Positives = 76/130 (58%), Gaps = 18/130 (13%)
 Frame = +3

Query: 168 LMTRNFLRIAIFNISYIRGLFP--------VPALEMKIKKL----------IDWMEKGVY 293
           L+TRN LRIAIFNISYIRGLFP        VPAL+MKIKKL          IDWMEKGVY
Sbjct: 17  LLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALDMKIKKLMPMDAESRRLIDWMEKGVY 76

Query: 294 DALQNKYLKTLLFCVCQFVKQ*KDQ*LRNMLVS*ISREYIMRK*S*SGKLCLFAVSFSYS 473
           DALQ KYLKTL+FC+C+ V               +  EY              A SFSYS
Sbjct: 77  DALQRKYLKTLMFCICETVD------------GPMIEEY--------------AFSFSYS 110

Query: 474 NSDSQQVMMN 503
           +SDSQ VMMN
Sbjct: 111 DSDSQDVMMN 120


>ref|XP_002514918.1| protein with unknown function [Ricinus communis]
           gi|223545969|gb|EEF47472.1| protein with unknown
           function [Ricinus communis]
          Length = 613

 Score =  109 bits (272), Expect = 3e-22
 Identities = 70/130 (53%), Positives = 75/130 (57%), Gaps = 18/130 (13%)
 Frame = +3

Query: 168 LMTRNFLRIAIFNISYIRGLFP--------VPALEMKIKKL----------IDWMEKGVY 293
           L+TRN LRIAIFNISYIRGLFP        VPALEMKIKKL          IDWMEKGVY
Sbjct: 19  LLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDPESRRLIDWMEKGVY 78

Query: 294 DALQNKYLKTLLFCVCQFVKQ*KDQ*LRNMLVS*ISREYIMRK*S*SGKLCLFAVSFSYS 473
           DALQ KYLKTLLFCVC+                 +  EY              + SFSYS
Sbjct: 79  DALQKKYLKTLLFCVCEATD------------GPMIEEY--------------SFSFSYS 112

Query: 474 NSDSQQVMMN 503
           NSDSQ+V MN
Sbjct: 113 NSDSQEVSMN 122


>ref|XP_003601788.1| HORMA domain-containing protein [Medicago truncatula]
           gi|355490836|gb|AES72039.1| HORMA domain-containing
           protein [Medicago truncatula]
          Length = 613

 Score =  107 bits (266), Expect = 1e-21
 Identities = 69/130 (53%), Positives = 75/130 (57%), Gaps = 18/130 (13%)
 Frame = +3

Query: 168 LMTRNFLRIAIFNISYIRGLFP--------VPALEMKIKKL----------IDWMEKGVY 293
           L+TRN LRIAIFNISYIRGLFP        VPALEMKIKKL          IDWMEKGVY
Sbjct: 19  LLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLLPVDAESRRLIDWMEKGVY 78

Query: 294 DALQNKYLKTLLFCVCQFVKQ*KDQ*LRNMLVS*ISREYIMRK*S*SGKLCLFAVSFSYS 473
           DALQ KYLKTLLFCVC+ V               +  EY              A SFSYS
Sbjct: 79  DALQKKYLKTLLFCVCEAVD------------GPMIEEY--------------AFSFSYS 112

Query: 474 NSDSQQVMMN 503
           +S+ Q+V MN
Sbjct: 113 DSEKQEVSMN 122


>ref|XP_003537535.1| PREDICTED: uncharacterized protein LOC100790032 [Glycine max]
          Length = 637

 Score =  105 bits (263), Expect = 3e-21
 Identities = 68/130 (52%), Positives = 74/130 (56%), Gaps = 18/130 (13%)
 Frame = +3

Query: 168 LMTRNFLRIAIFNISYIRGLFP--------VPALEMKIKKL----------IDWMEKGVY 293
           L+TR  LRIAIFNISYIRGLFP        VPALEMKIKKL          IDWMEKGVY
Sbjct: 23  LLTRILLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVY 82

Query: 294 DALQNKYLKTLLFCVCQFVKQ*KDQ*LRNMLVS*ISREYIMRK*S*SGKLCLFAVSFSYS 473
           DALQ KYLKTLLFCVC+ V                              L  +A SFSYS
Sbjct: 83  DALQKKYLKTLLFCVCEAVD--------------------------GPMLEEYAFSFSYS 116

Query: 474 NSDSQQVMMN 503
           +SD+Q+V MN
Sbjct: 117 DSDNQEVSMN 126


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