BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010821
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324749.1| predicted protein [Populus trichocarpa] gi|3...    86   3e-15
ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    81   8e-14
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    77   1e-12
ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    72   7e-11
ref|NP_001050789.1| Os03g0651000 [Oryza sativa Japonica Group] g...    69   4e-10

>ref|XP_002324749.1| predicted protein [Populus trichocarpa]
           gi|353558759|sp|B9INH0.1|GATC_POPTR RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|222866183|gb|EEF03314.1| predicted
           protein [Populus trichocarpa]
          Length = 141

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = -2

Query: 532 PALRADAEGDNLRQDTPETFENREAILAAVPNYDDPYIKVPQVVNKE 392
           P++RAD EGDNLR D PETFENREAI+AAVPNY+DPY+KVP+V+NKE
Sbjct: 95  PSIRADTEGDNLRHDNPETFENREAIIAAVPNYEDPYVKVPKVLNKE 141


>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/47 (70%), Positives = 45/47 (95%)
 Frame = -2

Query: 532 PALRADAEGDNLRQDTPETFENREAILAAVPNYDDPYIKVPQVVNKE 392
           P++RAD EGDNLR D+PETFENREAI+AA+P+Y++PY+KVP+V+NK+
Sbjct: 91  PSIRADTEGDNLRDDSPETFENREAIIAAIPSYEEPYLKVPKVLNKD 137


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -2

Query: 532 PALRADAEGDNLRQDTPETFENREAILAAVPNYDDPYIKVPQVVNKE 392
           PA+RAD+EG+NLR D PETF  REAI+AAVP+Y+ PY+KVP+V+NKE
Sbjct: 97  PAIRADSEGENLRDDVPETFSEREAIIAAVPSYEKPYVKVPKVLNKE 143


>ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = -2

Query: 532 PALRADAEGDNLRQDTPETFENREAILAAVPNYDDPYIKVPQVVNKE 392
           P++RAD EG + R D PETFENREA++ AVP +D+PYIKVP+V+NKE
Sbjct: 99  PSIRADTEGGSQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE 145


>ref|NP_001050789.1| Os03g0651000 [Oryza sativa Japonica Group]
           gi|75271878|sp|Q7XZZ1.1|GATC_ORYSJ RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|353558757|sp|A2XK57.1|GATC_ORYSI
           RecName: Full=Glutamyl-tRNA(Gln) amidotransferase
           subunit C, chloroplastic/mitochondrial; Short=Glu-AdT
           subunit C; Flags: Precursor gi|31712092|gb|AAP68396.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|62733418|gb|AAX95535.1| Putative Glutamyl-tRNA(Gln)
           amidotransferase, C subunit [Oryza sativa Japonica
           Group] gi|108710125|gb|ABF97920.1| glutamyl-tRNA
           amidotransferase, C subunit family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549260|dbj|BAF12703.1| Os03g0651000 [Oryza sativa
           Japonica Group] gi|125545078|gb|EAY91217.1| hypothetical
           protein OsI_12826 [Oryza sativa Indica Group]
           gi|125587301|gb|EAZ27965.1| hypothetical protein
           OsJ_11926 [Oryza sativa Japonica Group]
           gi|215767743|dbj|BAG99971.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 153

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/48 (66%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = -2

Query: 532 PALRAD-AEGDNLRQDTPETFENREAILAAVPNYDDPYIKVPQVVNKE 392
           P+LRA  A G++LR+D PETF NR+AI+ +VP+YDDPYIKVP+V+NKE
Sbjct: 106 PSLRAGTAAGNSLREDRPETFTNRDAIIESVPSYDDPYIKVPRVLNKE 153