BLASTX nr result
ID: Coptis24_contig00010817
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010817 (911 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera] 242 1e-78 ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y... 242 1e-78 ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y... 229 5e-73 ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase Y... 227 7e-70 ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y... 227 7e-70 >emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera] Length = 408 Score = 242 bits (617), Expect(2) = 1e-78 Identities = 118/134 (88%), Positives = 125/134 (93%) Frame = -2 Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224 KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187 Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44 EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247 Query: 43 DYSVLMGQISSSAL 2 DY VLMGQISSSAL Sbjct: 248 DYEVLMGQISSSAL 261 Score = 78.6 bits (192), Expect(2) = 1e-78 Identities = 40/70 (57%), Positives = 45/70 (64%) Frame = -3 Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502 ERYG+D+ E +S+ S V E+PKPPRTTHKLLQVL G ARRKK Sbjct: 64 ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123 Query: 501 LLSPKGMDVR 472 LLSPKGMDVR Sbjct: 124 LLSPKGMDVR 133 >ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera] gi|296087748|emb|CBI35004.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 242 bits (617), Expect(2) = 1e-78 Identities = 118/134 (88%), Positives = 125/134 (93%) Frame = -2 Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224 KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187 Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44 EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247 Query: 43 DYSVLMGQISSSAL 2 DY VLMGQISSSAL Sbjct: 248 DYEVLMGQISSSAL 261 Score = 78.6 bits (192), Expect(2) = 1e-78 Identities = 40/70 (57%), Positives = 45/70 (64%) Frame = -3 Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502 ERYG+D+ E +S+ S V E+PKPPRTTHKLLQVL G ARRKK Sbjct: 64 ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123 Query: 501 LLSPKGMDVR 472 LLSPKGMDVR Sbjct: 124 LLSPKGMDVR 133 >ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max] Length = 311 Score = 229 bits (584), Expect(2) = 5e-73 Identities = 111/134 (82%), Positives = 121/134 (90%) Frame = -2 Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224 KGMDVRPMMEVVKGAAFDILQ AGG PA+LRPGRWLDLYSGTGSVGIEA+SRGCS+ HFV Sbjct: 128 KGMDVRPMMEVVKGAAFDILQAAGGCPAALRPGRWLDLYSGTGSVGIEALSRGCSQVHFV 187 Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44 EMDPWV+S+VLRPNLE T FLDASVIHT+RVE F ERA++FVG +G FDYISVTPPYT V Sbjct: 188 EMDPWVVSDVLRPNLEETGFLDASVIHTVRVEKFFERAEQFVGNSGPFDYISVTPPYTQV 247 Query: 43 DYSVLMGQISSSAL 2 DY VLM QIS S+L Sbjct: 248 DYGVLMRQISESSL 261 Score = 72.4 bits (176), Expect(2) = 5e-73 Identities = 43/73 (58%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Frame = -3 Query: 681 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXGSSVV-PLEEPKPPRTTHKLLQVLAGTAR 511 E+YG+D + E SQSSS G V P E+PKPPR THKLLQVL GTAR Sbjct: 61 EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120 Query: 510 RKKLLSPKGMDVR 472 R KLLSPKGMDVR Sbjct: 121 RVKLLSPKGMDVR 133 >ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis sativus] Length = 315 Score = 227 bits (578), Expect(2) = 7e-70 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -2 Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224 KG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV Sbjct: 127 KGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFV 186 Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44 EMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G FDYISVTPPYT V Sbjct: 187 EMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQV 246 Query: 43 DYSVLMGQISSSAL 2 DY VLMGQ+S SAL Sbjct: 247 DYGVLMGQLSKSAL 260 Score = 64.3 bits (155), Expect(2) = 7e-70 Identities = 36/70 (51%), Positives = 43/70 (61%) Frame = -3 Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502 E+YG D E LS+ S+ + P E+PKP R THKLLQVL G+ARR K Sbjct: 66 EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQVLGGSARRMK 122 Query: 501 LLSPKGMDVR 472 LLSPKG+DVR Sbjct: 123 LLSPKGLDVR 132 >ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis sativus] Length = 313 Score = 227 bits (578), Expect(2) = 7e-70 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -2 Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224 KG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV Sbjct: 127 KGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFV 186 Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44 EMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G FDYISVTPPYT V Sbjct: 187 EMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQV 246 Query: 43 DYSVLMGQISSSAL 2 DY VLMGQ+S SAL Sbjct: 247 DYGVLMGQLSKSAL 260 Score = 64.3 bits (155), Expect(2) = 7e-70 Identities = 36/70 (51%), Positives = 43/70 (61%) Frame = -3 Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502 E+YG D E LS+ S+ + P E+PKP R THKLLQVL G+ARR K Sbjct: 66 EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQVLGGSARRMK 122 Query: 501 LLSPKGMDVR 472 LLSPKG+DVR Sbjct: 123 LLSPKGLDVR 132