BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010817
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]   242   1e-78
ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...   242   1e-78
ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y...   229   5e-73
ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase Y...   227   7e-70
ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y...   227   7e-70

>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score =  242 bits (617), Expect(2) = 1e-78
 Identities = 118/134 (88%), Positives = 125/134 (93%)
 Frame = -2

Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224
           KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187

Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44
           EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247

Query: 43  DYSVLMGQISSSAL 2
           DY VLMGQISSSAL
Sbjct: 248 DYEVLMGQISSSAL 261



 Score = 78.6 bits (192), Expect(2) = 1e-78
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = -3

Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502
           ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 501 LLSPKGMDVR 472
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  242 bits (617), Expect(2) = 1e-78
 Identities = 118/134 (88%), Positives = 125/134 (93%)
 Frame = -2

Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224
           KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187

Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44
           EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247

Query: 43  DYSVLMGQISSSAL 2
           DY VLMGQISSSAL
Sbjct: 248 DYEVLMGQISSSAL 261



 Score = 78.6 bits (192), Expect(2) = 1e-78
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = -3

Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502
           ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 501 LLSPKGMDVR 472
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max]
          Length = 311

 Score =  229 bits (584), Expect(2) = 5e-73
 Identities = 111/134 (82%), Positives = 121/134 (90%)
 Frame = -2

Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224
           KGMDVRPMMEVVKGAAFDILQ AGG PA+LRPGRWLDLYSGTGSVGIEA+SRGCS+ HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQAAGGCPAALRPGRWLDLYSGTGSVGIEALSRGCSQVHFV 187

Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44
           EMDPWV+S+VLRPNLE T FLDASVIHT+RVE F ERA++FVG +G FDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEETGFLDASVIHTVRVEKFFERAEQFVGNSGPFDYISVTPPYTQV 247

Query: 43  DYSVLMGQISSSAL 2
           DY VLM QIS S+L
Sbjct: 248 DYGVLMRQISESSL 261



 Score = 72.4 bits (176), Expect(2) = 5e-73
 Identities = 43/73 (58%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -3

Query: 681 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXGSSVV-PLEEPKPPRTTHKLLQVLAGTAR 511
           E+YG+D  + E  SQSSS             G  V  P E+PKPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 510 RKKLLSPKGMDVR 472
           R KLLSPKGMDVR
Sbjct: 121 RVKLLSPKGMDVR 133


>ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 315

 Score =  227 bits (578), Expect(2) = 7e-70
 Identities = 109/134 (81%), Positives = 118/134 (88%)
 Frame = -2

Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224
           KG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 127 KGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFV 186

Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44
           EMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G    FDYISVTPPYT V
Sbjct: 187 EMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQV 246

Query: 43  DYSVLMGQISSSAL 2
           DY VLMGQ+S SAL
Sbjct: 247 DYGVLMGQLSKSAL 260



 Score = 64.3 bits (155), Expect(2) = 7e-70
 Identities = 36/70 (51%), Positives = 43/70 (61%)
 Frame = -3

Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502
           E+YG D  E LS+ S+                + P E+PKP R THKLLQVL G+ARR K
Sbjct: 66  EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQVLGGSARRMK 122

Query: 501 LLSPKGMDVR 472
           LLSPKG+DVR
Sbjct: 123 LLSPKGLDVR 132


>ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 313

 Score =  227 bits (578), Expect(2) = 7e-70
 Identities = 109/134 (81%), Positives = 118/134 (88%)
 Frame = -2

Query: 403 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 224
           KG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 127 KGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFV 186

Query: 223 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 44
           EMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G    FDYISVTPPYT V
Sbjct: 187 EMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQV 246

Query: 43  DYSVLMGQISSSAL 2
           DY VLMGQ+S SAL
Sbjct: 247 DYGVLMGQLSKSAL 260



 Score = 64.3 bits (155), Expect(2) = 7e-70
 Identities = 36/70 (51%), Positives = 43/70 (61%)
 Frame = -3

Query: 681 ERYGFDSKELLSQSSSXXXXXXXXXXXXXGSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 502
           E+YG D  E LS+ S+                + P E+PKP R THKLLQVL G+ARR K
Sbjct: 66  EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQVLGGSARRMK 122

Query: 501 LLSPKGMDVR 472
           LLSPKG+DVR
Sbjct: 123 LLSPKGLDVR 132