BLASTX nr result

ID: Coptis24_contig00010813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010813
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA11499.1| basic leucine zipper protein [Spinacia oleracea]      176   5e-42
ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-...   171   1e-40
ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putat...   169   6e-40
gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus r...   169   6e-40
gb|AFK38807.1| unknown [Medicago truncatula]                          164   2e-38

>emb|CAA11499.1| basic leucine zipper protein [Spinacia oleracea]
          Length = 422

 Score =  176 bits (446), Expect = 5e-42
 Identities = 96/187 (51%), Positives = 114/187 (60%), Gaps = 5/187 (2%)
 Frame = -3

Query: 624 MGNEEGDTNIKPEKASSPAQEPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPPP 445
           MG+ +   + K EK S PA E + +H YP+WAA+QAYYGP V LPP YFNSAV  GHPPP
Sbjct: 1   MGSSDDVKSPKSEKTSPPATEHNGVHMYPDWAAMQAYYGPRVALPP-YFNSAVAPGHPPP 59

Query: 444 HPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLVPPPQGLGDSSPSAASEAMVVTPLS 265
            PYMWG PQ ++PPYG PYAA+Y PGGVYAHP+  +       + +P A SE +V TPLS
Sbjct: 60  -PYMWGPPQPMVPPYGAPYAAIYAPGGVYAHPAIPLASQAHGQEVAPPAVSEPLVATPLS 118

Query: 264 MATPAKSSSSKDQGFTKKLKRLNGSTTVI----XXXXXXXXXXXXXGDCGTEGSS-GSDD 100
           M TPAKS  + D+GF KKLK  NG    I                     +EGSS GSD 
Sbjct: 119 MDTPAKSPKNADKGFIKKLKGFNGLAMSIGNGNTEKTEGDVENRLSQSAESEGSSNGSDG 178

Query: 99  NSTEGKD 79
           N TE  D
Sbjct: 179 NYTEDAD 185


>ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-like [Vitis vinifera]
           gi|297745388|emb|CBI40468.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  171 bits (434), Expect = 1e-40
 Identities = 98/205 (47%), Positives = 118/205 (57%), Gaps = 11/205 (5%)
 Frame = -3

Query: 624 MGNEEGDTNIKPEKASSPAQ-EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPP 448
           MGNEE   + KPEK +SP   + +NIH YP+WAA+QAYYGP V LPP Y+NSA+ SGH P
Sbjct: 1   MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTLPP-YYNSAMASGHAP 59

Query: 447 PHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSF-LVPPPQGLGDSSPSAASEAMVVTP 271
            HPY+WG PQ +MPPYG PYAA+Y PGGVY HP+  L     G G  S    SEA+   P
Sbjct: 60  -HPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHPAVPLGSHSHGHGVQSSPVVSEALAAPP 118

Query: 270 LSMATPAKSSSSKDQGFTKKLKRLNGSTTVIXXXXXXXXXXXXXGDCG----TEGSSGSD 103
           LS+ TPAKSS + D+G  KKLK  +G    I                     TEGSS   
Sbjct: 119 LSIETPAKSSGNTDRGLMKKLKGFDGLAMSIGNGNGESTEGGSDHGLSQSGETEGSSDGS 178

Query: 102 DNSTEGKD-----RKVDGLTAYGGN 43
           D +T G D     R  +G    GG+
Sbjct: 179 DGNTAGADQTRRKRSREGTPPIGGD 203


>ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putative [Ricinus communis]
           gi|223549135|gb|EEF50624.1| Common plant regulatory
           factor CPRF-1, putative [Ricinus communis]
          Length = 401

 Score =  169 bits (428), Expect = 6e-40
 Identities = 98/203 (48%), Positives = 124/203 (61%), Gaps = 10/203 (4%)
 Frame = -3

Query: 624 MGNEEGDTNIKPEKASSPAQ-EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPP 448
           MGN E   + K +K+SSPA  + +NIH YP+WAA+QAYYGP + LPP Y+NSA+ SGH P
Sbjct: 3   MGNNEEGKSAKRDKSSSPAPPDQANIHVYPDWAAMQAYYGPRMALPP-YYNSAMASGHAP 61

Query: 447 PHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLV---PPPQGLGDSSPSAASEAMVV 277
            HPYMWG PQ +MPPYGTPYAA+Y  GGVYAHP+  +   PP  G+  +SP+A      V
Sbjct: 62  -HPYMWGPPQPMMPPYGTPYAAVYSHGGVYAHPAVPIGSQPPGHGV-PASPAA------V 113

Query: 276 TPLSMATPAKSSSSKDQGFTKKLKRLNGSTTVI-----XXXXXXXXXXXXXGDCGTEGS- 115
           TPL++ TP KS+ + D+G  KKLK  +G    I                      TEGS 
Sbjct: 114 TPLNVETPTKSTGNADRGLIKKLKGFDGLAMSIGNGHSKVESAEGGERRLSQSSETEGST 173

Query: 114 SGSDDNSTEGKDRKVDGLTAYGG 46
           +GSD N+T GK R  +G    GG
Sbjct: 174 NGSDGNTTAGKKRSREGTPTIGG 196


>gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus roseus]
          Length = 426

 Score =  169 bits (428), Expect = 6e-40
 Identities = 100/203 (49%), Positives = 122/203 (60%), Gaps = 7/203 (3%)
 Frame = -3

Query: 624 MGNEEGDTNIKPEKASSPAQEPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPPP 445
           MG+ E   + KPEK+SSPA E SN+H YP+WAA+QAYYGP V +PP YF+SAV SGHPP 
Sbjct: 1   MGSSEETKSSKPEKSSSPAPEQSNVHVYPDWAAMQAYYGPRVAVPP-YFSSAVASGHPP- 58

Query: 444 HPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLVPPPQG------LGDSSPSAASEAM 283
           HPYMWG PQ +MPPYGTPYAA+Y  GGVY HP      P G       G +SP  A+EA+
Sbjct: 59  HPYMWGPPQPMMPPYGTPYAAIYAHGGVYTHPGV----PLGSHANAHAGATSP-GATEAI 113

Query: 282 VVTPLSMATPAKSSSSKDQGFTKKLKRLNGSTTVIXXXXXXXXXXXXXGDCGTE-GSSGS 106
             +PLS+ TP KSS++  QG   KL+  +G    I              D GT+ G S S
Sbjct: 114 AASPLSIDTPTKSSANGSQGLMNKLRGFDGLAMSI------GNGNTDSADGGTDHGISQS 167

Query: 105 DDNSTEGKDRKVDGLTAYGGNAN 37
            D  TEG     +G T+  G  N
Sbjct: 168 GD--TEGSSDGSNGTTSKAGQKN 188


>gb|AFK38807.1| unknown [Medicago truncatula]
          Length = 425

 Score =  164 bits (415), Expect = 2e-38
 Identities = 92/192 (47%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
 Frame = -3

Query: 624 MGNEEGDTNIKPEKASSPAQ----EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSG 457
           MGN + + + K EK SSP        +N+H YP+WAA+QAYYGP V +PP Y+NS V SG
Sbjct: 1   MGNSDEEKSTKTEKPSSPVTVDQTNQTNVHVYPDWAAMQAYYGPRVAMPP-YYNSPVASG 59

Query: 456 HPPPHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLV-PPPQGLGDSSPSAASEAMV 280
           H P HPYMWG PQ +MPPYG PYAAMYP GGVY HP+  + P P   G SS  A      
Sbjct: 60  HTP-HPYMWGPPQPMMPPYGHPYAAMYPHGGVYTHPAVPIGPHPHSQGISSSPATG---- 114

Query: 279 VTPLSMATPAKSSSSKDQGFTKKLKRLNGSTTVI----XXXXXXXXXXXXXGDCGTEGSS 112
            TPLS+ TP KSS + DQG  KKLK  +G  T I                     TEGSS
Sbjct: 115 -TPLSIETPPKSSGNTDQGLMKKLKGFDGLATSIGNGHAESAEPGAESRQSQSVNTEGSS 173

Query: 111 GSDDNSTEGKDR 76
              D +T G ++
Sbjct: 174 DGSDGNTSGANQ 185


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