BLASTX nr result

ID: Coptis24_contig00010812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010812
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vi...   194   5e-48
ref|XP_003603000.1| Myb transcription factor [Medicago truncatul...   193   1e-47
emb|CCA29118.1| putative MYB transcription factor [Rosa hybrid c...   192   2e-47
emb|CCA29104.1| putative MYB transcription factor [Rosa rugosa]       192   2e-47
ref|XP_002327107.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47

>ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vitis vinifera]
          Length = 216

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/126 (75%), Positives = 104/126 (82%), Gaps = 6/126 (4%)
 Frame = -2

Query: 379 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 200
           K++RIKG WSAEEDR LT LV  +GARNW+LISR I GRSGKSCRLRWCNQLSPSVEHRP
Sbjct: 30  KSERIKGSWSAEEDRVLTRLVERYGARNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRP 89

Query: 199 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKK------HIEGKESS 38
           FS +EDDTILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLKK+       +EG   S
Sbjct: 90  FSAAEDDTILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKKRQREQSQQMEGPSGS 149

Query: 37  TSCGDV 20
            S  D+
Sbjct: 150 GSYPDM 155


>ref|XP_003603000.1| Myb transcription factor [Medicago truncatula]
           gi|355492048|gb|AES73251.1| Myb transcription factor
           [Medicago truncatula] gi|388499774|gb|AFK37953.1|
           unknown [Medicago truncatula]
          Length = 226

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/123 (76%), Positives = 102/123 (82%)
 Frame = -2

Query: 379 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 200
           K DRIKGPWSAEEDR LT LV  HGARNW+LISR I GRSGKSCRLRWCNQLSP+VEHRP
Sbjct: 32  KLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRP 91

Query: 199 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKESSTSCGDV 20
           FS  ED+TI+AAH +YGNRWATIA+LLPGRTDNAVKNHWNSTLK++   G  S T  G  
Sbjct: 92  FSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAGCG-GSVTVAGGG 150

Query: 19  NNG 11
           N G
Sbjct: 151 NEG 153


>emb|CCA29118.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 256

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/106 (83%), Positives = 97/106 (91%)
 Frame = -2

Query: 379 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 200
           K +RIKGPWSAEEDR LT LV  +G RNW+LISR I GRSGKSCRLRWCNQLSPSV+HRP
Sbjct: 32  KAERIKGPWSAEEDRVLTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVQHRP 91

Query: 199 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKK 62
           FSQ+ED+TILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLK++
Sbjct: 92  FSQAEDETILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 137


>emb|CCA29104.1| putative MYB transcription factor [Rosa rugosa]
          Length = 253

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/106 (83%), Positives = 97/106 (91%)
 Frame = -2

Query: 379 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 200
           K +RIKGPWSAEEDR LT LV  +G RNW+LISR I GRSGKSCRLRWCNQLSPSV+HRP
Sbjct: 32  KAERIKGPWSAEEDRVLTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVQHRP 91

Query: 199 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKK 62
           FSQ+ED+TILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLK++
Sbjct: 92  FSQAEDETILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 137


>ref|XP_002327107.1| predicted protein [Populus trichocarpa] gi|222835422|gb|EEE73857.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/124 (71%), Positives = 103/124 (83%)
 Frame = -2

Query: 379 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 200
           K++RIKGPWSAEEDR LT LV  HG RNW+LISR I GRSGKSCRLRWCNQLSP+V+HRP
Sbjct: 32  KSERIKGPWSAEEDRILTRLVEQHGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVQHRP 91

Query: 199 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKESSTSCGDV 20
           FS  ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E +      G+ 
Sbjct: 92  FSPVEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQSQMNLEGNF 151

Query: 19  NNGY 8
           ++ Y
Sbjct: 152 DSNY 155


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