BLASTX nr result

ID: Coptis24_contig00010804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010804
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285817.1| PREDICTED: uncharacterized protein At4g37920...   545   e-152
ref|XP_004138642.1| PREDICTED: uncharacterized protein At4g37920...   522   e-146
ref|XP_002513854.1| conserved hypothetical protein [Ricinus comm...   518   e-144
ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144
ref|XP_003535049.1| PREDICTED: uncharacterized protein At4g37920...   509   e-142

>ref|XP_002285817.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic [Vitis
            vinifera] gi|302141900|emb|CBI19103.3| unnamed protein
            product [Vitis vinifera]
          Length = 429

 Score =  545 bits (1404), Expect = e-152
 Identities = 269/377 (71%), Positives = 319/377 (84%), Gaps = 28/377 (7%)
 Frame = -1

Query: 1222 STAPVVGGETAVPNDSETQ---------------------------DHDVLYDDKMIRVC 1124
            S A +VG  TAVP+ S  +                           D + L + KMIRVC
Sbjct: 53   SVASIVGDTTAVPSRSTGEPLSFSSSSDPAVDKDVIGYGEKRDGKDDPECLDNHKMIRVC 112

Query: 1123 DKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDNPEMKHNLFRLARK 944
            DKLI VFMVDKPTPTDWRRLLAFS+EW N+RPHF+RRCQ+RAD+E +P  KH+L RL RK
Sbjct: 113  DKLIEVFMVDKPTPTDWRRLLAFSKEWSNIRPHFYRRCQDRADSEGDPGKKHSLLRLGRK 172

Query: 943  LKEIDEDVERHNELLRVIKES-ASDISGLVARRRKDFTKEFFVHLHTVAESYYDNPSEQN 767
            LKEIDEDV+RHNELL VIK +  +DIS +VA+RRKDFTKEFFVHLHTVAESY+DNP+EQN
Sbjct: 173  LKEIDEDVKRHNELLEVIKGTPPADISAVVAKRRKDFTKEFFVHLHTVAESYHDNPTEQN 232

Query: 766  DLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLAEKNQLDS 587
             LAKLGN C+AAVQ YDTASESIEALNAAELKFQ+I+NSPS+D AC+KID+LAEKNQLDS
Sbjct: 233  ALAKLGNMCLAAVQTYDTASESIEALNAAELKFQDILNSPSLDVACRKIDSLAEKNQLDS 292

Query: 586  ALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSAKGNLQRLMPKEIRILKYLLTIEDPEQ 407
            ALVLMITKAWSAAK+SNM KDE KD+L+HLY +A+GNLQRLMPKEIRILKYLLTIEDPE+
Sbjct: 293  ALVLMITKAWSAAKESNMTKDEVKDVLFHLYTTARGNLQRLMPKEIRILKYLLTIEDPEE 352

Query: 406  RLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEARDLMSPK 227
            ++ +LKDAFTPGDE+EGKD+DCLYTTPEKLHTW++TVV+A++FSREGTLI+EARDLM+PK
Sbjct: 353  KMSALKDAFTPGDEIEGKDVDCLYTTPEKLHTWMQTVVDAFHFSREGTLIREARDLMNPK 412

Query: 226  VIQRLEEMKKVLENNFM 176
            +IQ+LEE+KK++++NFM
Sbjct: 413  IIQKLEELKKLVQDNFM 429


>ref|XP_004138642.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like
            [Cucumis sativus] gi|449490104|ref|XP_004158509.1|
            PREDICTED: uncharacterized protein At4g37920,
            chloroplastic-like [Cucumis sativus]
          Length = 437

 Score =  522 bits (1345), Expect = e-146
 Identities = 257/384 (66%), Positives = 312/384 (81%), Gaps = 22/384 (5%)
 Frame = -1

Query: 1261 HISPSSCKFKALLSTAPVVGGETAVPNDSETQDHDVLYDD-------------------- 1142
            H  P    F A       V G  AVP+D  ++  D+L                       
Sbjct: 60   HDRPKKSSFSAF------VRGVKAVPSDCNSETLDLLNPSSDEPVRDVQNAKDSVENLDQ 113

Query: 1141 -KMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDNPEMKHN 965
             KM +VCDKLI VFM+DKPTP DWRRL+AFS+EW N+RPHFF RCQ+RA +ED+P MKH 
Sbjct: 114  HKMTKVCDKLIEVFMIDKPTPKDWRRLIAFSKEWDNIRPHFFNRCQDRAASEDDPGMKHK 173

Query: 964  LFRLARKLKEIDEDVERHNELLRVIKE-SASDISGLVARRRKDFTKEFFVHLHTVAESYY 788
            L R  RKLKEIDEDV+RHNELL V++  S S++  +++RRRKDFTKEFFVHLHTVA+SYY
Sbjct: 174  LLRFGRKLKEIDEDVQRHNELLEVVRATSPSELGEIISRRRKDFTKEFFVHLHTVAQSYY 233

Query: 787  DNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLA 608
            D+P++QN LAKLGN+C+AAVQ YD A+E+IEALNAAELKFQ+IINSP+IDAAC+KIDNLA
Sbjct: 234  DDPAKQNALAKLGNSCLAAVQTYDAATENIEALNAAELKFQDIINSPTIDAACRKIDNLA 293

Query: 607  EKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSAKGNLQRLMPKEIRILKYLL 428
            EKNQLDSALVLMITKAWSAAK+SNM+K+EAKDILYHLY +A+GNLQRLMPKEIRILKYLL
Sbjct: 294  EKNQLDSALVLMITKAWSAAKESNMMKEEAKDILYHLYVTARGNLQRLMPKEIRILKYLL 353

Query: 427  TIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEA 248
            TI DPE++L +LKDAFTPG+ELEG+D+DCLYTTPE+LHTW+KTVV+AY+FSREGTL++EA
Sbjct: 354  TINDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEELHTWVKTVVDAYHFSREGTLVREA 413

Query: 247  RDLMSPKVIQRLEEMKKVLENNFM 176
            RDLM+P++I +LEE+K ++E  FM
Sbjct: 414  RDLMNPQLIVKLEELKGLIEKKFM 437


>ref|XP_002513854.1| conserved hypothetical protein [Ricinus communis]
            gi|223546940|gb|EEF48437.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 399

 Score =  518 bits (1334), Expect = e-144
 Identities = 244/324 (75%), Positives = 296/324 (91%)
 Frame = -1

Query: 1147 DDKMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDNPEMKH 968
            +DKM+RVCDKLIGVFMVDK TP DWRRLLAFS+EW N+RPHF+ RCQERAD+E++P +KH
Sbjct: 76   EDKMVRVCDKLIGVFMVDKNTPADWRRLLAFSKEWDNIRPHFYSRCQERADSENDPGIKH 135

Query: 967  NLFRLARKLKEIDEDVERHNELLRVIKESASDISGLVARRRKDFTKEFFVHLHTVAESYY 788
             L R ARKLKEIDEDV+RHNELL VIK + S+IS +VARRRKDFTKEFFVH+ TVA+SY+
Sbjct: 136  KLLRFARKLKEIDEDVQRHNELLEVIKNAPSEISEVVARRRKDFTKEFFVHVFTVAQSYH 195

Query: 787  DNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLA 608
            DNP+ QN LAKLGN CVAAVQAYD+ +ES+EAL+AAELK Q+IINSPS+D+AC+KID+LA
Sbjct: 196  DNPTVQNALAKLGNDCVAAVQAYDSTTESMEALHAAELKLQDIINSPSLDSACRKIDDLA 255

Query: 607  EKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSAKGNLQRLMPKEIRILKYLL 428
             KNQLDS+LVLMITKAWSAAK+SNM KDE KDIL+HLYK+A GNLQRL+PK+IRI+K+LL
Sbjct: 256  AKNQLDSSLVLMITKAWSAAKESNMTKDEVKDILFHLYKTAVGNLQRLVPKDIRIVKHLL 315

Query: 427  TIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEA 248
             IEDPE+ LC+L DAFTPG+E+EG D+DCLYTTPEKLHTWIK VV+AY+ S+EGTLI+EA
Sbjct: 316  KIEDPEELLCALTDAFTPGEEIEGNDVDCLYTTPEKLHTWIKAVVDAYHSSQEGTLIREA 375

Query: 247  RDLMSPKVIQRLEEMKKVLENNFM 176
            RDLM+PK++++LEE+KK++E+NFM
Sbjct: 376  RDLMNPKIVKKLEELKKLIEDNFM 399


>ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|222843997|gb|EEE81544.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  518 bits (1334), Expect = e-144
 Identities = 245/321 (76%), Positives = 293/321 (91%)
 Frame = -1

Query: 1138 MIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQERADAEDNPEMKHNLF 959
            M  VC+KLI VFMVDKPTP DWR+LLAFS+EW NLRPHF++RCQERAD ED+P  KHNL 
Sbjct: 1    MASVCNKLIEVFMVDKPTPNDWRKLLAFSKEWDNLRPHFYKRCQERADCEDDPGKKHNLL 60

Query: 958  RLARKLKEIDEDVERHNELLRVIKESASDISGLVARRRKDFTKEFFVHLHTVAESYYDNP 779
            R ARKLKEIDEDV+RHNELL VIK + S+++ +VA+RRKDFTKEFFVHL+TVA+SY+DNP
Sbjct: 61   RFARKLKEIDEDVQRHNELLGVIKAAPSELTEIVAKRRKDFTKEFFVHLYTVAQSYHDNP 120

Query: 778  SEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSPSIDAACKKIDNLAEKN 599
            SEQN LAKLGN CVA VQAYD A+E++EALNAAELK Q+IINSPS+DAACKKID+LAEKN
Sbjct: 121  SEQNALAKLGNDCVATVQAYDCATENMEALNAAELKLQDIINSPSLDAACKKIDDLAEKN 180

Query: 598  QLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSAKGNLQRLMPKEIRILKYLLTIE 419
            Q DSALVLMITKAWSAAK+SNM KDE KDILYHLYK+A GNLQR +PK+IRILKYLLT+E
Sbjct: 181  QFDSALVLMITKAWSAAKESNMTKDEVKDILYHLYKTAIGNLQRNVPKDIRILKYLLTVE 240

Query: 418  DPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEAYNFSREGTLIKEARDL 239
            DPE+RLC+L DAFTPG+ELEGKD+D LYTTPEKLHTWIK +V+AY+ S++GTL++EARDL
Sbjct: 241  DPEERLCALNDAFTPGEELEGKDVDSLYTTPEKLHTWIKAMVDAYHLSQDGTLMREARDL 300

Query: 238  MSPKVIQRLEEMKKVLENNFM 176
            M+PK+I+++EE+KK++E++FM
Sbjct: 301  MNPKIIKKMEELKKLVEDHFM 321


>ref|XP_003535049.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like
            [Glycine max]
          Length = 389

 Score =  509 bits (1311), Expect = e-142
 Identities = 245/337 (72%), Positives = 296/337 (87%), Gaps = 1/337 (0%)
 Frame = -1

Query: 1183 NDSETQDHDVLYDDKMIRVCDKLIGVFMVDKPTPTDWRRLLAFSREWPNLRPHFFRRCQE 1004
            ++  + + +VL + ++ RVCDKLIGVFMVDKPTPT WRRLLAFSREW NLRPHFF RC E
Sbjct: 53   SEGSSAEAEVLEESRIRRVCDKLIGVFMVDKPTPTHWRRLLAFSREWSNLRPHFFARCLE 112

Query: 1003 RADA-EDNPEMKHNLFRLARKLKEIDEDVERHNELLRVIKESASDISGLVARRRKDFTKE 827
            RADA E++P MK  L RLARKLK+IDEDV+RHN+LL V++   S IS +V++RRKDFT+E
Sbjct: 113  RADAAEEDPAMKEKLLRLARKLKQIDEDVQRHNDLLEVVRRDPSGISEIVSKRRKDFTEE 172

Query: 826  FFVHLHTVAESYYDNPSEQNDLAKLGNTCVAAVQAYDTASESIEALNAAELKFQEIINSP 647
            FFVH HTVAESYY+N  EQN+LAKLGN C+AAVQAYD A+ES+E L AAELKFQ+IINSP
Sbjct: 173  FFVHFHTVAESYYENKEEQNELAKLGNACLAAVQAYDAATESVEKLQAAELKFQDIINSP 232

Query: 646  SIDAACKKIDNLAEKNQLDSALVLMITKAWSAAKDSNMVKDEAKDILYHLYKSAKGNLQR 467
            S+DAAC+KIDNLAEK +LDS LVLMITKAWSA+K+SNM+KDE KDILYHLYK+A GNLQR
Sbjct: 233  SLDAACRKIDNLAEKKELDSTLVLMITKAWSASKESNMMKDEVKDILYHLYKTAVGNLQR 292

Query: 466  LMPKEIRILKYLLTIEDPEQRLCSLKDAFTPGDELEGKDIDCLYTTPEKLHTWIKTVVEA 287
            L+PKEIRI+KYL+ IEDPE++L +LKDAFTPG+ELEG D+D LYTTPEKLHTWIK+V++A
Sbjct: 293  LVPKEIRIVKYLIRIEDPEEQLSALKDAFTPGEELEGTDVDNLYTTPEKLHTWIKSVLDA 352

Query: 286  YNFSREGTLIKEARDLMSPKVIQRLEEMKKVLENNFM 176
            Y+ S EGTLI+EARDL++P+VIQ+LE +KKV+E NFM
Sbjct: 353  YHLSGEGTLIREARDLLNPEVIQKLEVLKKVVEKNFM 389


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