BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010786
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002522167.1| pentatricopeptide repeat-containing protein,...   108   6e-22
ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]         103   1e-20
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   103   1e-20

>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/92 (56%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NLKENRWESRILLPLY-------KIGTISKICDPNPCVEECLAAIEAWGKVGKVEEAEAV 99
           NL+E+RW  R +LPLY       ++  + K C+ +P ++EC+AAIEAWG++ K++EAEAV
Sbjct: 322 NLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPRLDECMAAIEAWGRLKKIDEAEAV 381

Query: 98  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 3
           F+ M++TWKKLSSR+Y+TLLKVYANHKM +KG
Sbjct: 382 FELMSKTWKKLSSRHYSTLLKVYANHKMLSKG 413


>ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538605|gb|EEF40208.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 342

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/92 (54%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NLKENRWESRILLPLY-------KIGTISKICDPNPCVEECLAAIEAWGKVGKVEEAEAV 99
           NL+E+RW  R+LLPLY       ++  + K+C+ +P +EEC+A IEAWGK+ K+++AE V
Sbjct: 109 NLEEHRWACRLLLPLYAALGKADEVERVWKVCESSPQLEECVAVIEAWGKLKKIDKAEEV 168

Query: 98  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 3
           F+RM  TWKKLSSR+Y+ LLKVYA+HKM   G
Sbjct: 169 FNRMLTTWKKLSSRHYSALLKVYASHKMLANG 200


>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/92 (52%), Positives = 70/92 (76%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NLKENRWESRILLPLY-------KIGTISKICDPNPCVEECLAAIEAWGKVGKVEEAEAV 99
           NL+E+RW  + +LPLY       ++  + K C  +P ++EC+AAIEAWG++ K+ EAEAV
Sbjct: 239 NLEEHRWACQFMLPLYGTLGKADEVSRLWKFCKKSPRLDECMAAIEAWGQLKKIPEAEAV 298

Query: 98  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 3
           F+ M++TWKKLSS++Y+ LLKVYAN+KM +KG
Sbjct: 299 FELMSKTWKKLSSKHYSALLKVYANNKMLSKG 330


>gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
          Length = 608

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NLKENRWESRILLPLY-------KIGTISKICDPNPCVEECLAAIEAWGKVGKVEEAEAV 99
           N K +RW  R LLPLY       ++  + +IC+PNP VEEC+AAI AWGK+  ++EAE +
Sbjct: 375 NSKGSRWPCRYLLPLYGELQMEDEVRRLWEICEPNPNVEECMAAIVAWGKLKNIQEAEKI 434

Query: 98  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 3
           FDR+ +TWK+LS+++Y+T++KVY + KM TKG
Sbjct: 435 FDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKG 466


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/92 (55%), Positives = 68/92 (73%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NLKENRWESRILLPLY-------KIGTISKICDPNPCVEECLAAIEAWGKVGKVEEAEAV 99
           NLKENRW  R+LL LY       ++G + K+C+  P VE+C+AAIEAWGK+ K++EAEAV
Sbjct: 391 NLKENRWVCRLLLALYAKLGMADEVGRVWKVCETRPSVEDCVAAIEAWGKLKKIDEAEAV 450

Query: 98  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 3
           F+ M + W KL+S+N + LL VYAN+KM TKG
Sbjct: 451 FEVMARKW-KLTSKNCSVLLNVYANNKMLTKG 481