BLASTX nr result

ID: Coptis24_contig00010781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010781
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [...   164   7e-39
ref|XP_003541147.1| PREDICTED: UPF0712 protein C7orf64 homolog [...   160   8e-38
gb|ACU17018.1| unknown [Glycine max]                                  160   8e-38
ref|XP_002525357.1| nucleic acid binding protein, putative [Rici...   160   8e-38
emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]   160   8e-38

>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
           gi|297739067|emb|CBI28556.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/125 (66%), Positives = 97/125 (77%)
 Frame = +2

Query: 26  RNETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLLESYGXXXXXXXXXXXXXXXFTDV 205
           R+E PAVRVYT+CDES+YLIV+NVPALGCGD++L L  SYG               FTDV
Sbjct: 5   RDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEPFTDV 64

Query: 206 YWIKFLQVSNARFAKRKLDEFVFLGNKLHVSYASNFETLIDTKEKLECRRREVLARLNKP 385
           YWIKF  VSNARFAKRKLDEFVFLGN+L V YA +FE+L DTKEKLE RR+EVL+RLN P
Sbjct: 65  YWIKFRLVSNARFAKRKLDEFVFLGNRLKVEYAPHFESLSDTKEKLEGRRKEVLSRLN-P 123

Query: 386 SRAEI 400
            R+++
Sbjct: 124 GRSKM 128


>ref|XP_003541147.1| PREDICTED: UPF0712 protein C7orf64 homolog [Glycine max]
          Length = 221

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/128 (65%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
 Frame = +2

Query: 20  MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLLESYGXXXXXXXXXXXXXXX 193
           MPR  +E+PAVRVYTVCDES+YLIV+NVP LGCGDE+LKL  SYG               
Sbjct: 1   MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDELLKLFSSYGEVEECKPMDAEDCEK 60

Query: 194 FTDVYWIKFLQVSNARFAKRKLDEFVFLGNKLHVSYASNFETLIDTKEKLECRRREVLAR 373
           +TDV+WIKF  V+NARFAKRKLD+FVF GNKL VSYA  FE+L DT +KLE RRREVLAR
Sbjct: 61  YTDVFWIKFRLVNNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTMDKLEGRRREVLAR 120

Query: 374 LNKPSRAE 397
           LN P R++
Sbjct: 121 LN-PRRSK 127


>gb|ACU17018.1| unknown [Glycine max]
          Length = 216

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/128 (65%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
 Frame = +2

Query: 20  MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLLESYGXXXXXXXXXXXXXXX 193
           MPR  +E+PAVRVYTVCDES+YLIV+NVP LGCGDE+LKL  SYG               
Sbjct: 1   MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDELLKLFSSYGEVEECKPMDAEDCEK 60

Query: 194 FTDVYWIKFLQVSNARFAKRKLDEFVFLGNKLHVSYASNFETLIDTKEKLECRRREVLAR 373
           +TDV+WIKF  V+NARFAKRKLD+FVF GNKL VSYA  FE+L DT +KLE RRREVLAR
Sbjct: 61  YTDVFWIKFRLVNNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTMDKLEGRRREVLAR 120

Query: 374 LNKPSRAE 397
           LN P R++
Sbjct: 121 LN-PRRSK 127


>ref|XP_002525357.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535320|gb|EEF36995.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 216

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = +2

Query: 20  MPR--NETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLLESYGXXXXXXXXXXXXXXX 193
           MPR  +E PA+RVYT+CDES+YLIV+NVPALGCGD++LKL  SYG               
Sbjct: 1   MPRYKDEAPAIRVYTICDESRYLIVRNVPALGCGDDLLKLFASYGDVEDFKPMDAEDCDQ 60

Query: 194 FTDVYWIKFLQVSNARFAKRKLDEFVFLGNKLHVSYASNFETLIDTKEKLECRRREVLAR 373
           FTDVYWIKF  V NARFAKRKLDE+VF+GN+L VSYA +FETL DTK+KLE R +EVL+R
Sbjct: 61  FTDVYWIKFSLVCNARFAKRKLDEYVFMGNRLQVSYAPHFETLSDTKDKLEGRIKEVLSR 120

Query: 374 LNKPSRAE 397
           LN P R++
Sbjct: 121 LN-PGRSK 127


>emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]
          Length = 230

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/125 (64%), Positives = 95/125 (76%)
 Frame = +2

Query: 26  RNETPAVRVYTVCDESKYLIVKNVPALGCGDEVLKLLESYGXXXXXXXXXXXXXXXFTDV 205
           R+E PAVRVYT+CDES+YLIV+NVPALGCGD++L L  SYG               FTDV
Sbjct: 5   RDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEPFTDV 64

Query: 206 YWIKFLQVSNARFAKRKLDEFVFLGNKLHVSYASNFETLIDTKEKLECRRREVLARLNKP 385
           YW KF  VSNARFAKRKLDEFVFLGN+L   YA +FE+L DTKEKLE RR+EVL+RLN P
Sbjct: 65  YWXKFRLVSNARFAKRKLDEFVFLGNRLKAEYAPHFESLSDTKEKLEGRRKEVLSRLN-P 123

Query: 386 SRAEI 400
            R+++
Sbjct: 124 GRSKM 128


Top