BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010780
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ...   387   e-105
sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom...   387   e-105
ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|3...   378   e-103
dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Gro...   370   e-100
gb|AFW66488.1| putative translation elongation factor family pro...   370   e-100

>ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis
            vinifera] gi|296082645|emb|CBI21650.3| unnamed protein
            product [Vitis vinifera]
          Length = 680

 Score =  387 bits (994), Expect = e-105
 Identities = 196/219 (89%), Positives = 208/219 (94%)
 Frame = -1

Query: 728  VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549
            VECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRRGEFKEMK++TENRAS
Sbjct: 462  VECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRRGEFKEMKFITENRAS 521

Query: 548  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369
            ITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDIQING+RV+PLATIVH
Sbjct: 522  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDIQINGERVEPLATIVH 581

Query: 368  KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189
            KDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVLSKCYGGDITR
Sbjct: 582  KDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLSKCYGGDITR 641

Query: 188  XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72
                  KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 642  KKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680


>sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|147841933|emb|CAN60938.1| hypothetical protein
            VITISV_013255 [Vitis vinifera]
          Length = 680

 Score =  387 bits (994), Expect = e-105
 Identities = 196/219 (89%), Positives = 208/219 (94%)
 Frame = -1

Query: 728  VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549
            VECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRRGEFKEMK++TENRAS
Sbjct: 462  VECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRRGEFKEMKFITENRAS 521

Query: 548  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369
            ITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDIQING+RV+PLATIVH
Sbjct: 522  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDIQINGERVEPLATIVH 581

Query: 368  KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189
            KDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVLSKCYGGDITR
Sbjct: 582  KDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLSKCYGGDITR 641

Query: 188  XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72
                  KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 642  KKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680


>ref|XP_002300223.1| predicted protein [Populus trichocarpa]
            gi|317411668|sp|B9GHA6.1|GUFP_POPTR RecName:
            Full=Translation factor GUF1 homolog, chloroplastic;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|222847481|gb|EEE85028.1| predicted protein [Populus
            trichocarpa]
          Length = 639

 Score =  378 bits (971), Expect = e-103
 Identities = 190/219 (86%), Positives = 207/219 (94%)
 Frame = -1

Query: 728  VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549
            VECSNPS LPEPG+R+S+EEP+VKIELLTPK+YIG+LMEL Q+RRGEFKEMKY+TENRAS
Sbjct: 421  VECSNPSLLPEPGKRRSVEEPFVKIELLTPKDYIGTLMELAQERRGEFKEMKYITENRAS 480

Query: 548  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369
            ITYELPLAEMVGDFFDQLKSRSKGYASMEY+ VGY+ESDL++LDIQINGD V+PLATIVH
Sbjct: 481  ITYELPLAEMVGDFFDQLKSRSKGYASMEYTVVGYKESDLIRLDIQINGDPVEPLATIVH 540

Query: 368  KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189
            KDKAY+VGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVL+KCYGGDI+R
Sbjct: 541  KDKAYSVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLAKCYGGDISR 600

Query: 188  XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72
                  KQA GKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 601  KKKLLKKQAAGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 639


>dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Group]
            gi|50252173|dbj|BAD28168.1| putative LepA protein [Oryza
            sativa Japonica Group]
          Length = 680

 Score =  370 bits (950), Expect = e-100
 Identities = 186/219 (84%), Positives = 204/219 (93%)
 Frame = -1

Query: 728  VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549
            VECSNPS LPEPG+R+SIEEPYVKI++LTPKEYIG +MEL Q+RRGEFKEM ++TENRAS
Sbjct: 462  VECSNPSLLPEPGKRRSIEEPYVKIDMLTPKEYIGPIMELGQERRGEFKEMNFITENRAS 521

Query: 548  ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369
            + YELPLAEMVGDFFDQLKSRSKGYASMEYS +GYRES+LVKLDIQINGD V+ L+TIVH
Sbjct: 522  VVYELPLAEMVGDFFDQLKSRSKGYASMEYSLIGYRESNLVKLDIQINGDPVEALSTIVH 581

Query: 368  KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189
            +DKAY+VGRALTQKLKELIPRQMF+VPIQA IGAKVIASEALSAIRKDVLSKCYGGDI+R
Sbjct: 582  RDKAYSVGRALTQKLKELIPRQMFRVPIQACIGAKVIASEALSAIRKDVLSKCYGGDISR 641

Query: 188  XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72
                  KQAEGKKRMKAIG+VDVPQEAFMAVLKLEKEVL
Sbjct: 642  KKKLLKKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 680


>gb|AFW66488.1| putative translation elongation factor family protein [Zea mays]
          Length = 356

 Score =  370 bits (950), Expect = e-100
 Identities = 187/219 (85%), Positives = 203/219 (92%)
 Frame = -1

Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549
           VECSNPS LPEPG+R+SIEEPYVKIE+LTPK+YIGS+MELTQDRRGEFKEM ++TE+RA 
Sbjct: 138 VECSNPSLLPEPGKRRSIEEPYVKIEMLTPKDYIGSIMELTQDRRGEFKEMNFITESRAK 197

Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369
           + YELPLAEMVGDFFDQLKSRSKGYASMEYS VGYRES LVKLDIQINGD V+ L+TIVH
Sbjct: 198 LIYELPLAEMVGDFFDQLKSRSKGYASMEYSVVGYRESQLVKLDIQINGDPVEALSTIVH 257

Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189
           +DKAYAVGRALTQKLKELIPRQMF+VPIQA IG KVIASEALSAIRKDVLSKCYGGDI+R
Sbjct: 258 RDKAYAVGRALTQKLKELIPRQMFRVPIQACIGTKVIASEALSAIRKDVLSKCYGGDISR 317

Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72
                 KQAEGKKRMKAIG+VDVPQEAFMAVL+LEKEVL
Sbjct: 318 KKKLLKKQAEGKKRMKAIGRVDVPQEAFMAVLRLEKEVL 356