BLASTX nr result
ID: Coptis24_contig00010780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010780 (728 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ... 387 e-105 sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom... 387 e-105 ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|3... 378 e-103 dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Gro... 370 e-100 gb|AFW66488.1| putative translation elongation factor family pro... 370 e-100 >ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis vinifera] gi|296082645|emb|CBI21650.3| unnamed protein product [Vitis vinifera] Length = 680 Score = 387 bits (994), Expect = e-105 Identities = 196/219 (89%), Positives = 208/219 (94%) Frame = -1 Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549 VECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRRGEFKEMK++TENRAS Sbjct: 462 VECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRRGEFKEMKFITENRAS 521 Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDIQING+RV+PLATIVH Sbjct: 522 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDIQINGERVEPLATIVH 581 Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189 KDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVLSKCYGGDITR Sbjct: 582 KDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLSKCYGGDITR 641 Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72 KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL Sbjct: 642 KKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680 >sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic; AltName: Full=Elongation factor 4 homolog; Short=EF-4; AltName: Full=GTPase GUF1 homolog; AltName: Full=Ribosomal back-translocase; Flags: Precursor gi|147841933|emb|CAN60938.1| hypothetical protein VITISV_013255 [Vitis vinifera] Length = 680 Score = 387 bits (994), Expect = e-105 Identities = 196/219 (89%), Positives = 208/219 (94%) Frame = -1 Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549 VECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRRGEFKEMK++TENRAS Sbjct: 462 VECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRRGEFKEMKFITENRAS 521 Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDIQING+RV+PLATIVH Sbjct: 522 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDIQINGERVEPLATIVH 581 Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189 KDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVLSKCYGGDITR Sbjct: 582 KDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLSKCYGGDITR 641 Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72 KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL Sbjct: 642 KKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680 >ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|317411668|sp|B9GHA6.1|GUFP_POPTR RecName: Full=Translation factor GUF1 homolog, chloroplastic; AltName: Full=Elongation factor 4 homolog; Short=EF-4; AltName: Full=GTPase GUF1 homolog; AltName: Full=Ribosomal back-translocase; Flags: Precursor gi|222847481|gb|EEE85028.1| predicted protein [Populus trichocarpa] Length = 639 Score = 378 bits (971), Expect = e-103 Identities = 190/219 (86%), Positives = 207/219 (94%) Frame = -1 Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549 VECSNPS LPEPG+R+S+EEP+VKIELLTPK+YIG+LMEL Q+RRGEFKEMKY+TENRAS Sbjct: 421 VECSNPSLLPEPGKRRSVEEPFVKIELLTPKDYIGTLMELAQERRGEFKEMKYITENRAS 480 Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369 ITYELPLAEMVGDFFDQLKSRSKGYASMEY+ VGY+ESDL++LDIQINGD V+PLATIVH Sbjct: 481 ITYELPLAEMVGDFFDQLKSRSKGYASMEYTVVGYKESDLIRLDIQINGDPVEPLATIVH 540 Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189 KDKAY+VGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAIRKDVL+KCYGGDI+R Sbjct: 541 KDKAYSVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLAKCYGGDISR 600 Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72 KQA GKKRMKAIGKVDVPQEAFMAVLKLEKEVL Sbjct: 601 KKKLLKKQAAGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 639 >dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Group] gi|50252173|dbj|BAD28168.1| putative LepA protein [Oryza sativa Japonica Group] Length = 680 Score = 370 bits (950), Expect = e-100 Identities = 186/219 (84%), Positives = 204/219 (93%) Frame = -1 Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549 VECSNPS LPEPG+R+SIEEPYVKI++LTPKEYIG +MEL Q+RRGEFKEM ++TENRAS Sbjct: 462 VECSNPSLLPEPGKRRSIEEPYVKIDMLTPKEYIGPIMELGQERRGEFKEMNFITENRAS 521 Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369 + YELPLAEMVGDFFDQLKSRSKGYASMEYS +GYRES+LVKLDIQINGD V+ L+TIVH Sbjct: 522 VVYELPLAEMVGDFFDQLKSRSKGYASMEYSLIGYRESNLVKLDIQINGDPVEALSTIVH 581 Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189 +DKAY+VGRALTQKLKELIPRQMF+VPIQA IGAKVIASEALSAIRKDVLSKCYGGDI+R Sbjct: 582 RDKAYSVGRALTQKLKELIPRQMFRVPIQACIGAKVIASEALSAIRKDVLSKCYGGDISR 641 Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72 KQAEGKKRMKAIG+VDVPQEAFMAVLKLEKEVL Sbjct: 642 KKKLLKKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL 680 >gb|AFW66488.1| putative translation elongation factor family protein [Zea mays] Length = 356 Score = 370 bits (950), Expect = e-100 Identities = 187/219 (85%), Positives = 203/219 (92%) Frame = -1 Query: 728 VECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRRGEFKEMKYVTENRAS 549 VECSNPS LPEPG+R+SIEEPYVKIE+LTPK+YIGS+MELTQDRRGEFKEM ++TE+RA Sbjct: 138 VECSNPSLLPEPGKRRSIEEPYVKIEMLTPKDYIGSIMELTQDRRGEFKEMNFITESRAK 197 Query: 548 ITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDIQINGDRVDPLATIVH 369 + YELPLAEMVGDFFDQLKSRSKGYASMEYS VGYRES LVKLDIQINGD V+ L+TIVH Sbjct: 198 LIYELPLAEMVGDFFDQLKSRSKGYASMEYSVVGYRESQLVKLDIQINGDPVEALSTIVH 257 Query: 368 KDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAIRKDVLSKCYGGDITR 189 +DKAYAVGRALTQKLKELIPRQMF+VPIQA IG KVIASEALSAIRKDVLSKCYGGDI+R Sbjct: 258 RDKAYAVGRALTQKLKELIPRQMFRVPIQACIGTKVIASEALSAIRKDVLSKCYGGDISR 317 Query: 188 XXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 72 KQAEGKKRMKAIG+VDVPQEAFMAVL+LEKEVL Sbjct: 318 KKKLLKKQAEGKKRMKAIGRVDVPQEAFMAVLRLEKEVL 356