BLASTX nr result

ID: Coptis24_contig00010777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010777
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17507.3| unnamed protein product [Vitis vinifera]               40   3e-06
ref|XP_002266501.1| PREDICTED: late embryogenesis abundant prote...    40   3e-06
ref|XP_002987057.1| hypothetical protein SELMODRAFT_271886 [Sela...    46   8e-06

>emb|CBI17507.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 350 TQKAKFNLQYAKEKGSQAAGDLGAKMRKD 436
           T++AK N + AKEK SQAAGDLGAK++ +
Sbjct: 343 TEQAKSNYEAAKEKASQAAGDLGAKIKTE 371



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = +3

Query: 69  VMGALKQGKDKATGATKQTYDTTK*TLEQGKDKAADATKQTYNSTKQTLEQGKQNAAETL 248
           V GA++ GKD A        +     ++ GKD A +            +E GK  AA   
Sbjct: 225 VAGAMEYGKDGAGNIYDGAKEKVAGAMQYGKDGAGNIYDGAKGKMGGAVEHGKDGAANVY 284

Query: 249 SGK-----------AQKAKEAKETVKG----GKDKATE 317
            G            + KA + KETV+G    GKDK  +
Sbjct: 285 DGAKEKMNTAADAVSDKASDVKETVEGAMGHGKDKVAD 322


>ref|XP_002266501.1| PREDICTED: late embryogenesis abundant protein D-29 [Vitis
           vinifera]
          Length = 375

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 350 TQKAKFNLQYAKEKGSQAAGDLGAKMRKD 436
           T++AK N + AKEK SQAAGDLGAK++ +
Sbjct: 343 TEQAKSNYEAAKEKASQAAGDLGAKIKTE 371



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = +3

Query: 69  VMGALKQGKDKATGATKQTYDTTK*TLEQGKDKAADATKQTYNSTKQTLEQGKQNAAETL 248
           V GA++ GKD A        +     ++ GKD A +            +E GK  AA   
Sbjct: 225 VAGAMEYGKDGAGNIYDGAKEKVAGAMQYGKDGAGNIYDGAKGKMGGAVEHGKDGAANVY 284

Query: 249 SGK-----------AQKAKEAKETVKG----GKDKATE 317
            G            + KA + KETV+G    GKDK  +
Sbjct: 285 DGAKEKMNTAADAVSDKASDVKETVEGAMGHGKDKVAD 322


>ref|XP_002987057.1| hypothetical protein SELMODRAFT_271886 [Selaginella moellendorffii]
           gi|300145222|gb|EFJ11900.1| hypothetical protein
           SELMODRAFT_271886 [Selaginella moellendorffii]
          Length = 389

 Score = 45.8 bits (107), Expect(2) = 8e-06
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
 Frame = +3

Query: 84  KQGKDKATGATKQTYDTTK*TLEQGKDKAADATK----QTYNSTKQTLEQGKQNAAETLS 251
           K+ KD+A+  TK   D T  + ++ KD+A+++ K    Q   STK+T EQG  +AA+   
Sbjct: 277 KEAKDQASETTKNAKDQTSESAKKAKDQASESAKKVKDQARESTKKTTEQG-SDAAKKAQ 335

Query: 252 GKAQKAKEA-----KETVKGGKDKA 311
            KA  AK+A     +   K G +KA
Sbjct: 336 EKADAAKQAVNEKSEAASKSGSEKA 360



 Score = 29.3 bits (64), Expect(2) = 8e-06
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 350 TQKAKFNLQYAKEKGSQAAGDLGAKMRKD-DEL 445
           ++KAK   + AKE  S+A G+LG K++   DEL
Sbjct: 357 SEKAKSQYESAKEAASKATGELGEKLKASRDEL 389


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