BLASTX nr result

ID: Coptis24_contig00010774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010774
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250...   288   2e-75
ref|XP_002514758.1| membrane associated ring finger 1,8, putativ...   284   3e-74
emb|CBI31954.3| unnamed protein product [Vitis vinifera]              282   1e-73
ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256...   280   5e-73
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   277   6e-72

>ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera]
            gi|297733975|emb|CBI15222.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  288 bits (737), Expect = 2e-75
 Identities = 168/299 (56%), Positives = 182/299 (60%), Gaps = 6/299 (2%)
 Frame = -3

Query: 1199 MSDHVVLLVDRLITPATSQSVLPDEASKST---GEGSSSNTSAFPTGG--KNAXXXXXXX 1035
            M DH+VL VDRLI P T QS+   E S S+    EGS S+T    T              
Sbjct: 1    MGDHLVLCVDRLIKPQTLQSLQGTEVSGSSEGGDEGSCSHTVDPSTSALEDKGLEEHHGP 60

Query: 1034 XXXXXXXXXXECRICQEEDSIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHEP 855
                      ECRICQEEDSIKNLE PCACSGSLKFAHRKCVQRWCNEKGD TCEICH+P
Sbjct: 61   EEEEPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDVTCEICHQP 120

Query: 854  YQPGYTAPPPSSQDATAIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEADYDEYEATN 675
            YQPGYTAPPP   +   IDISEGWTISGTPLDL+DPRLLAMAAAERHF+EA+Y+EY  TN
Sbjct: 121  YQPGYTAPPPPQSEDATIDISEGWTISGTPLDLNDPRLLAMAAAERHFLEAEYEEYADTN 180

Query: 674  ASGAAFCRSXXXXXXXXXXXXXXLNITNADGDGEEGDASTXXXXXXXXXXXXXLPCYIMA 495
            ASGAAFCRS              LNITNADGD    DAS              LPCYIMA
Sbjct: 181  ASGAAFCRSAALILMALLLLRHALNITNADGD---DDASNFFSLFLLRAAGFLLPCYIMA 237

Query: 494  WAISI-XXXXXXXXXXXXXXATEVAFLIQSGLRPGQRGGLQFTVXXXXXXXXXSTPRQE 321
            WAISI               ATEVAF++Q+    GQ  GLQFT+          TP QE
Sbjct: 238  WAISILQRRRQRQEAAAALAATEVAFMLQA----GQHRGLQFTI----APGPAVTPHQE 288


>ref|XP_002514758.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223546362|gb|EEF47864.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 292

 Score =  284 bits (727), Expect = 3e-74
 Identities = 158/285 (55%), Positives = 183/285 (64%), Gaps = 7/285 (2%)
 Frame = -3

Query: 1199 MSDHVVLLVDRLITPATSQSVLPDEASKSTGEGSSSNTSAFPT-------GGKNAXXXXX 1041
            MSD +VL  DRLITP + QS+   +   S+GE SSS+T+  PT       GG++      
Sbjct: 1    MSDQLVLCADRLITPESLQSMEKAKEPGSSGECSSSHTADLPTCVIDVEGGGEHGVSEEE 60

Query: 1040 XXXXXXXXXXXXECRICQEEDSIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICH 861
                         CRICQEEDSI NLE PCACSGSLKFAHRKCVQRWCNEKGD TCEICH
Sbjct: 61   EPLLQTME-----CRICQEEDSINNLEAPCACSGSLKFAHRKCVQRWCNEKGDITCEICH 115

Query: 860  EPYQPGYTAPPPSSQDATAIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEADYDEYEA 681
            +PYQP YTA PP   + TAIDISEGWTI+GTPLDLHDPR+LAMAAAERHF+EA+YDEY  
Sbjct: 116  QPYQPNYTASPPLPLEDTAIDISEGWTIAGTPLDLHDPRILAMAAAERHFLEAEYDEYAD 175

Query: 680  TNASGAAFCRSXXXXXXXXXXXXXXLNITNADGDGEEGDASTXXXXXXXXXXXXXLPCYI 501
            ++ASGAAFCRS              +++T   GD +E DAST             LPCYI
Sbjct: 176  SSASGAAFCRSAALILMALLLLRHAMSLT---GDSDE-DASTFFSLFLIRAAGFLLPCYI 231

Query: 500  MAWAISIXXXXXXXXXXXXXXATEVAFLIQSGLRPGQRGGLQFTV 366
            MAWAISI              ATEVAF++Q+    GQR GLQFT+
Sbjct: 232  MAWAISILQRRRQRQEAAALAATEVAFMLQA----GQRRGLQFTI 272


>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  282 bits (722), Expect = 1e-73
 Identities = 160/280 (57%), Positives = 176/280 (62%), Gaps = 1/280 (0%)
 Frame = -3

Query: 1202 KMSDHVVLLVDRLITPATSQSVLPDEASKSTGEGSSSNTSAFPTGGKNAXXXXXXXXXXX 1023
            KMSDH+VL VDR I P TSQSV   EA   T   S+S                       
Sbjct: 312  KMSDHLVLYVDRPIRPVTSQSV--QEAGAETAGPSTS------VADDKRVEENEGSNEEE 363

Query: 1022 XXXXXXECRICQEEDSIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHEPYQPG 843
                  ECRICQEEDS++NLETPCACSGSLK+AHRKCVQRWCNEKGD  CEICH+PYQPG
Sbjct: 364  PFLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPG 423

Query: 842  YTAPPPSSQ-DATAIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEADYDEYEATNASG 666
            YTAPPP    + TAIDI  GWTISGTPLDL DPRLLAMA AERHF+EA+YDEY ATNA+G
Sbjct: 424  YTAPPPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATG 483

Query: 665  AAFCRSXXXXXXXXXXXXXXLNITNADGDGEEGDASTXXXXXXXXXXXXXLPCYIMAWAI 486
            AAFCRS              L IT+AD DG++ D ST             LPCYIMAWAI
Sbjct: 484  AAFCRSVALILMALLLLRHALTITDADTDGDD-DTSTFFSLFLLRAAGFLLPCYIMAWAI 542

Query: 485  SIXXXXXXXXXXXXXXATEVAFLIQSGLRPGQRGGLQFTV 366
            SI              AT+VAF++QS    GQR GLQFTV
Sbjct: 543  SILQRRRQRQEAAALAATQVAFVLQS----GQRRGLQFTV 578


>ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256824 [Vitis vinifera]
            gi|147785386|emb|CAN70908.1| hypothetical protein
            VITISV_040117 [Vitis vinifera]
          Length = 279

 Score =  280 bits (717), Expect = 5e-73
 Identities = 159/279 (56%), Positives = 175/279 (62%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1199 MSDHVVLLVDRLITPATSQSVLPDEASKSTGEGSSSNTSAFPTGGKNAXXXXXXXXXXXX 1020
            MSDH+VL VDR I P TSQSV   EA   T   S+S                        
Sbjct: 1    MSDHLVLYVDRPIRPVTSQSV--QEAGAETAGPSTS------VADDKRVEENEGSNEEEP 52

Query: 1019 XXXXXECRICQEEDSIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHEPYQPGY 840
                 ECRICQEEDS++NLETPCACSGSLK+AHRKCVQRWCNEKGD  CEICH+PYQPGY
Sbjct: 53   FLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPGY 112

Query: 839  TAPPPSSQ-DATAIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEADYDEYEATNASGA 663
            TAPPP    + TAIDI  GWTISGTPLDL DPRLLAMA AERHF+EA+YDEY ATNA+GA
Sbjct: 113  TAPPPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATGA 172

Query: 662  AFCRSXXXXXXXXXXXXXXLNITNADGDGEEGDASTXXXXXXXXXXXXXLPCYIMAWAIS 483
            AFCRS              L IT+AD DG++ D ST             LPCYIMAWAIS
Sbjct: 173  AFCRSVALILMALLLLRHALTITDADTDGDD-DTSTFFSLFLLRAAGFLLPCYIMAWAIS 231

Query: 482  IXXXXXXXXXXXXXXATEVAFLIQSGLRPGQRGGLQFTV 366
            I              AT+VAF++QS    GQR GLQFTV
Sbjct: 232  ILQRRRQRQEAAALAATQVAFVLQS----GQRRGLQFTV 266


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223538320|gb|EEF39927.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  277 bits (708), Expect = 6e-72
 Identities = 156/281 (55%), Positives = 177/281 (62%), Gaps = 3/281 (1%)
 Frame = -3

Query: 1199 MSDHVVLLVDRLITPATSQSVLPDE-ASKSTGEGSSSNTSAFPTGGKNAXXXXXXXXXXX 1023
            MSDHVVL VDRLITP++S    P+E A ++    S S  +  P G               
Sbjct: 1    MSDHVVLYVDRLITPSSSS---PEEVADRAVAGPSCSRPNEEPNGVVQEKGNDDNDNEEE 57

Query: 1022 XXXXXXECRICQEEDSIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHEPYQPG 843
                  ECRICQEEDS+ NLETPCACSGSLK+AHRKCVQ WCNEKGD TCEICH+PYQPG
Sbjct: 58   PLIKVAECRICQEEDSVTNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHKPYQPG 117

Query: 842  YTAP--PPSSQDATAIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEADYDEYEATNAS 669
            YTAP  PP ++D TAIDI  GWTISGTPLDL DPRLLA+A AERHF+EA+YDEY A+NAS
Sbjct: 118  YTAPLRPPQAED-TAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAASNAS 176

Query: 668  GAAFCRSXXXXXXXXXXXXXXLNITNADGDGEEGDASTXXXXXXXXXXXXXLPCYIMAWA 489
            GAAFCRS              L +T+ADGD    D ST             LPCYIMAWA
Sbjct: 177  GAAFCRSAALILMALLLLRHALTVTDADGD---DDVSTFFSLFLLRAAGFLLPCYIMAWA 233

Query: 488  ISIXXXXXXXXXXXXXXATEVAFLIQSGLRPGQRGGLQFTV 366
            ISI              AT+VAF++QS    GQ  GL FT+
Sbjct: 234  ISILQRRRQRQEAAALAATQVAFVLQS----GQHRGLHFTI 270


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