BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010763
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   206   1e-50
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   206   1e-50
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   192   1e-46
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   191   3e-46
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   187   4e-45

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  206 bits (523), Expect = 1e-50
 Identities = 141/401 (35%), Positives = 203/401 (50%), Gaps = 37/401 (9%)
 Frame = +1

Query: 46   VVDWLELPGHLLSTIAEKLSGVDDYVRLGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 225
            + DW +L   LL  IA+K     DYVR  AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 226  THDNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENE 402
             H    R  + LS  +    Q+P   H R  RG S GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 403  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPTSNPN 516
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 517  YAVMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQP 696
            +  + I      +A  +  D  WT L+   +   DVI++   FY V+ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 697  HHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHENTYS-----------SIGFV 843
              P+VS +  P    G + +YLVESG +LLLV R   Y + TY            +  F 
Sbjct: 237  S-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEPDQTSLIYRTTRFQ 291

Query: 844  VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1023
            VC+L+    +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1024 RGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 1137
               G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  206 bits (523), Expect = 1e-50
 Identities = 141/401 (35%), Positives = 204/401 (50%), Gaps = 37/401 (9%)
 Frame = +1

Query: 46   VVDWLELPGHLLSTIAEKLSGVDDYVRLGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 225
            + DW +L   LL  IA+K     DYVR  AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 226  THDNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENE 402
             H    R  + LS  +    Q+P   H R  RG S GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 403  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPTSNPN 516
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 517  YAVMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQP 696
            +  + I      +A  +  D  WT L+   +   DVI++   FY V+ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 697  HHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHENTYS-----------SIGFV 843
              P+VS +  P    G + +YLVESG +LLLV R   Y + TY            +  F 
Sbjct: 237  S-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEXDQTSLIYRTTRFQ 291

Query: 844  VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1023
            VC+L++   +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1024 RGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 1137
               G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  192 bits (489), Expect = 1e-46
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 16/381 (4%)
 Frame = +1

Query: 46   VVDWLELPGHLLSTIAEKLSGVDDYVRLGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 225
            + DW ++P   L  IAEKL  V+DYVR G VCKSW S + + +  C   + P LML    
Sbjct: 919  MADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAE-- 976

Query: 226  THDNQTRSLYDLSRKRVLDFQVPVPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENEI 405
              +++ R  Y     +V + ++P    + C G  +GWLVT+  + ++ LLNP   +  +I
Sbjct: 977  KENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRV--QI 1034

Query: 406  HLPPLTAFE-----FHDENHGIWGCE-YLRKAVVSANPTSNPNYAVMAIHGGFNRIAFFK 567
             LP L A             G    + ++ KAV+S+ P S+P+ AVM I+  + R+AF K
Sbjct: 1035 LLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCAVMIIYSDYGRLAFTK 1093

Query: 568  PGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQPHHPKVSRVAPP----IG 735
            PG + WT L+S    V+D+IY+   F  V+    ++ CD++      +   A P    + 
Sbjct: 1094 PGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVD 1153

Query: 736  VHGEETKYLVESGGDLLLVIR----TRRYHENTYSSIGFVVCKLNTNEHKWTEVKSLLGH 903
                E KYLVESGG++ +V R    T R       +  F V KL+    +W EV++L   
Sbjct: 1154 EIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHC 1213

Query: 904  SVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGPHDIGVFNLEDCSFEA 1083
            S F+G+N SFS  ASD+P  + N IYFTDD+  G+           D+G++N ++   E 
Sbjct: 1214 SFFLGNNHSFSTWASDYPEFRKNSIYFTDDYC-GFLNIPRN----FDMGIYNFQNTQIE- 1267

Query: 1084 HYPL--ECAMIIPAPIWIEPT 1140
            HYP+  +   +  AP+WI P+
Sbjct: 1268 HYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  191 bits (486), Expect = 3e-46
 Identities = 130/399 (32%), Positives = 201/399 (50%), Gaps = 36/399 (9%)
 Frame = +1

Query: 49   VDWLELPGHLLSTIAEKLSGVDDYVRLGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPIT 228
            VDW +LP  L+  I++K++   DY+   AVC +W+S+ +   P  LP QLP L+LP   +
Sbjct: 3    VDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSS-IPKTPNHLPPQLPWLLLPQSQS 61

Query: 229  HDNQTRSLYDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENEI 405
            + +  R+ ++LS  +     +P   H +   G S GWL+ + ++  + ++NP      +I
Sbjct: 62   NQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT--RRKI 119

Query: 406  HLPPLTAF-EFHDENHGIWGCEYL---------------------RKAVVSANPTSNPN- 516
            HLP +++F      ++   G EYL                     +K V+S++P      
Sbjct: 120  HLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGD 179

Query: 517  -YAVMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQ 693
             +  MAI      +A+ K GD+ W  ++++ +   DVIY+   FY V+  G +  CD+N 
Sbjct: 180  FFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG 239

Query: 694  PHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTR----RYHENTYSSIGFVVCKLNT 861
             + PKVS +  P  + G+  +YLV SG  LLLV R       +    Y +  F V KL+ 
Sbjct: 240  -NSPKVSFIETPRQIGGD-MQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDL 297

Query: 862  NEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGPH 1041
            N  +W  V SL    +FIG+NSS +L AS   GC  +CIY+TDD+    Y   D  +G H
Sbjct: 298  NGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNY---DGHIGEH 354

Query: 1042 DIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 1137
            D+G+F L D S E   PL C        +  P P+WI P
Sbjct: 355  DLGIFKLSDGSIE---PLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  187 bits (476), Expect = 4e-45
 Identities = 131/405 (32%), Positives = 205/405 (50%), Gaps = 41/405 (10%)
 Frame = +1

Query: 46   VVDWLELPGHLLSTIAEKLSGVDDYVRLGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 225
            ++DW +LP  L+  I++ L+   DY+   AVC +WR + +   P  LP QLP LMLP   
Sbjct: 2    IMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQ 60

Query: 226  THDNQTR-SLYDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIEN 399
            +  NQ+R + + LS  +     +P V + +   G S GWL+ + +   + L+NP    + 
Sbjct: 61   SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAK- 119

Query: 400  EIHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPTSNP 513
             + LPPL++F      N+   G EY                     +RK V+S++P  + 
Sbjct: 120  -LSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDN 178

Query: 514  NYAVMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQ 693
            N+ V+AI    + +A+ + GDK W+ +++  +   DVI+    FY V+  G +  CD++ 
Sbjct: 179  NFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISS 238

Query: 694  PHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHEN----------TYSSIGFV 843
               P+VS +  P    G+  +YLV SG +LLLV R                  Y +I F 
Sbjct: 239  DS-PRVSFMETPRQAGGD-MQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFE 296

Query: 844  VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1023
            V +L+ N  +W  + +L   ++FIG+NSS SL A+DF GC  NCIY+TDD+L+  Y   D
Sbjct: 297  VFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANY---D 353

Query: 1024 RGVGPHDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 1137
               G HD+G+F L D + E   PL C        +    P+W+ P
Sbjct: 354  GHFGDHDLGIFKLCDETIE---PLPCYPRNFTSPLQWSPPLWVSP 395