BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010762
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310120.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|AFK41173.1| unknown [Lotus japonicus]                               75   6e-12
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|...    74   1e-11
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li...    72   4e-11
ref|NP_201525.2| small RNA degrading nuclease 3 [Arabidopsis tha...    71   1e-10

>ref|XP_002310120.1| predicted protein [Populus trichocarpa] gi|222853023|gb|EEE90570.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
 Frame = -3

Query: 475 DPQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGSTEQSTSKKRP 296
           +P+EA +AF+++    EKD+ GRPQK V  +  TG    + VRKM  D    Q   KKR 
Sbjct: 323 NPEEACQAFENLIGSLEKDTSGRPQKLVALQLDTGGSAGIRVRKMTHDSHVSQ---KKRS 379

Query: 295 LE-ENKGDGSLVQCTPTKKRSAEVENR---------DECEHHIKEIERLKKELRQRDDEV 146
            E E+ GD    +    +    E+E           ++C+ H+KEIERLK+E++ +D E+
Sbjct: 380 FEGEDSGDPKKPKIDQCEDHVKEIERLKQELKKQELNQCDDHLKEIERLKQEIKTKDFEI 439

Query: 145 ANLQKIITALTRK 107
               KIIT L RK
Sbjct: 440 TAQDKIITELKRK 452


>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 8/121 (6%)
 Frame = -3

Query: 469 QEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGSTEQSTSKKRPLE 290
           QEA +A+++++  + KDSFGRPQK V+F  STG+  +LFVRKM  D   +     KR L+
Sbjct: 372 QEAYEAYENVQGSQTKDSFGRPQKEVMFRPSTGMTVSLFVRKMTAD-EPDNLLQSKRALQ 430

Query: 289 ENKGDGSLVQCTPTKKRSAEVE--------NRDECEHHIKEIERLKKELRQRDDEVANLQ 134
            ++ D   V  +   K   ++E          D C  H+KEIE L ++L+Q+D E+ +L+
Sbjct: 431 VDEAD-EAVNASKKAKTVPQIEEDVLIGSTKGDTCT-HLKEIEALNEQLKQKDLEIESLR 488

Query: 133 K 131
           +
Sbjct: 489 E 489


>ref|XP_002524917.1| exonuclease, putative [Ricinus communis]
           gi|223535752|gb|EEF37414.1| exonuclease, putative
           [Ricinus communis]
          Length = 504

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
 Frame = -3

Query: 475 DPQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGSTEQSTSKKRP 296
           DPQEA  AF ++    EKD  G  QK +  +  TG    L+VRKM  D    Q   KKR 
Sbjct: 363 DPQEAHCAFDNLNGRLEKDKNGLLQKMITLKLKTGATANLYVRKMGHDHFIHQDLQKKRA 422

Query: 295 LE-ENKGDGSLVQCTPTKKRSAEVENRDECEHHIKEIERLKKELRQR-----DDEVANLQ 134
            + E+ G+        TKK       RD+C+ H+KEIERLK+EL+++     DD +  ++
Sbjct: 423 FQGEDIGN--------TKKL-----KRDDCDDHVKEIERLKQELKEKDLSKCDDHMKEIE 469

Query: 133 KIITALTRKQ 104
           K+   L+ K+
Sbjct: 470 KLKQNLSSKE 479


>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
          Length = 509

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
 Frame = -3

Query: 472 PQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGSTEQSTSKKRPL 293
           P EAD A+++++  + KD++G PQK V F  STGL   LFVRKM  +   +Q T  KR L
Sbjct: 368 PPEADGAYENVQGSQLKDTYGHPQKLVTFRLSTGLSVNLFVRKMVTEEPNDQ-TPSKRAL 426

Query: 292 EENKGDGSLVQCTPTKKRSAEVE-------NRDECEHHIKEIERLKKELRQRDDEVANLQ 134
           + N+     V  +   K   ++E        + + + H KEIE L ++L+Q +  + +L+
Sbjct: 427 QINEA----VDVSKKAKMDPKIEEDASAGFGKGDTDAHSKEIEALNQQLKQSEMVIESLR 482

Query: 133 KIIT 122
           K +T
Sbjct: 483 KQLT 486


>ref|NP_201525.2| small RNA degrading nuclease 3 [Arabidopsis thaliana]
            gi|75330762|sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small
            RNA degrading nuclease 3 gi|19423880|gb|AAL87318.1|
            unknown protein [Arabidopsis thaliana]
            gi|25055029|gb|AAN71976.1| unknown protein [Arabidopsis
            thaliana] gi|332010934|gb|AED98317.1| small RNA degrading
            nuclease 3 [Arabidopsis thaliana]
          Length = 782

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/122 (35%), Positives = 63/122 (51%)
 Frame = -3

Query: 472  PQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGSTEQSTSKKRPL 293
            P+EA+KAF+ ++ E  K+  G  QK V F+ S+G    L+VRKM  D S E   +     
Sbjct: 655  PEEANKAFEKVKGEAVKEKGGLAQKMVAFKLSSGSGACLYVRKMVQDESEETKEANANHC 714

Query: 292  EENKGDGSLVQCTPTKKRSAEVENRDECEHHIKEIERLKKELRQRDDEVANLQKIITALT 113
            E    D  L +    K++   +E    CE H KEIE LK++L  ++ ++    KII  L 
Sbjct: 715  E----DDHLKEMEELKEKLKAMEFAISCEGHSKEIEELKQKLNAKEHQIQAQDKIIANLK 770

Query: 112  RK 107
             K
Sbjct: 771  MK 772



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -3

Query: 472 PQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGS-TEQSTSKKRP 296
           P+EA++AF+++E +  KD  G PQK  V + S+GL  +LFVRKM  D S  E STS++  
Sbjct: 377 PEEANEAFENVEGDVAKDKSGLPQKKAVLKLSSGLAVSLFVRKMVQDDSPCEISTSERAR 436

Query: 295 LEENKGDGSLVQCTPTKKRSAEVENRDECEHHIKEIERLKKEL 167
            EEN           +K++  E E  +  E  + + E  K +L
Sbjct: 437 AEENN--------VSSKRQKTEDETEETKEATVNQREADKTKL 471



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = -3

Query: 472 PQEADKAFQSIEKEEEKDSFGRPQKYVVFERSTGLHTTLFVRKMAPDGST-EQSTSKKRP 296
           P+EA++AF+++E +  KD  G PQK VVF+ S+G   +L+VRKM  D S  E ST+K+  
Sbjct: 516 PEEANEAFENVEGDVVKDKTGLPQKMVVFKLSSGSGVSLYVRKMVHDDSPGEISTTKRAR 575

Query: 295 LEENKGDGSLVQCTPTKKRSAEVENRDECEHHIKEIERLKKEL 167
            EE+           +K++  E E+ +  E + K+ E  K +L
Sbjct: 576 TEESN--------MSSKRQKTEDESEETKEANAKQREADKTKL 610