BLASTX nr result
ID: Coptis24_contig00010759
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010759 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28658.3| unnamed protein product [Vitis vinifera] 75 4e-12 ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 compone... 75 4e-12 ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 5e-11 ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 5e-11 ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 5e-11 >emb|CBI28658.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 75.5 bits (184), Expect = 4e-12 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%) Frame = +2 Query: 281 AFGMSPKVVESDSKLVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVC 451 + G SP+ +L+T+AVA KADAS T +K GHELLLFEAL+EGLEEEMDRDPRVC Sbjct: 48 SLGSSPRS-RGAQRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVC 106 Query: 452 VM 457 VM Sbjct: 107 VM 108 >ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta [Vitis vinifera] Length = 405 Score = 75.5 bits (184), Expect = 4e-12 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%) Frame = +2 Query: 281 AFGMSPKVVESDSKLVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVC 451 + G SP+ +L+T+AVA KADAS T +K GHELLLFEAL+EGLEEEMDRDPRVC Sbjct: 48 SLGSSPRS-RGAQRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVC 106 Query: 452 VM 457 VM Sbjct: 107 VM 108 >ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like [Cucumis sativus] Length = 677 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%) Frame = +2 Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457 L+T+AVA KAD S T +K GHELLLFEAL+EGLEEEMDRDPRVCVM Sbjct: 333 LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 380 >ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like isoform 2 [Cucumis sativus] Length = 410 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%) Frame = +2 Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457 L+T+AVA KAD S T +K GHELLLFEAL+EGLEEEMDRDPRVCVM Sbjct: 66 LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 113 >ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like isoform 1 [Cucumis sativus] Length = 437 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%) Frame = +2 Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457 L+T+AVA KAD S T +K GHELLLFEAL+EGLEEEMDRDPRVCVM Sbjct: 93 LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 140