BLASTX nr result

ID: Coptis24_contig00010759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010759
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28658.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 compone...    75   4e-12
ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 compone...    72   5e-11
ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 compone...    72   5e-11
ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 compone...    72   5e-11

>emb|CBI28658.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
 Frame = +2

Query: 281 AFGMSPKVVESDSKLVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVC 451
           + G SP+      +L+T+AVA KADAS   T +K GHELLLFEAL+EGLEEEMDRDPRVC
Sbjct: 48  SLGSSPRS-RGAQRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVC 106

Query: 452 VM 457
           VM
Sbjct: 107 VM 108


>ref|XP_002269441.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta [Vitis
           vinifera]
          Length = 405

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
 Frame = +2

Query: 281 AFGMSPKVVESDSKLVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVC 451
           + G SP+      +L+T+AVA KADAS   T +K GHELLLFEAL+EGLEEEMDRDPRVC
Sbjct: 48  SLGSSPRS-RGAQRLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEEMDRDPRVC 106

Query: 452 VM 457
           VM
Sbjct: 107 VM 108


>ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
           [Cucumis sativus]
          Length = 677

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457
           L+T+AVA KAD S   T +K GHELLLFEAL+EGLEEEMDRDPRVCVM
Sbjct: 333 LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 380


>ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
           isoform 2 [Cucumis sativus]
          Length = 410

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457
           L+T+AVA KAD S   T +K GHELLLFEAL+EGLEEEMDRDPRVCVM
Sbjct: 66  LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 113


>ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
           isoform 1 [Cucumis sativus]
          Length = 437

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 323 LVTSAVAEKADAS---TKTKSGHELLLFEALQEGLEEEMDRDPRVCVM 457
           L+T+AVA KAD S   T +K GHELLLFEAL+EGLEEEMDRDPRVCVM
Sbjct: 93  LITNAVATKADTSSPSTTSKPGHELLLFEALREGLEEEMDRDPRVCVM 140


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