BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010750
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82812.1| hypothetical protein VITISV_007059 [Vitis vinifera]    57   2e-06
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     56   4e-06
emb|CAN69614.1| hypothetical protein VITISV_035011 [Vitis vinifera]    55   5e-06
gb|ABG37669.1| gag protein [Populus trichocarpa]                       55   6e-06
gb|ABG37660.1| integrase [Populus trichocarpa]                         55   6e-06

>emb|CAN82812.1| hypothetical protein VITISV_007059 [Vitis vinifera]
          Length = 1686

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = -1

Query: 161 PSFL*RLAMLKKDDNFDEIWEVFKNLTINLPFLDAIKRLPKHAKFLKDLCT 9
           PSF   L   K+ +N  EI+EV K + +N+P LD IK++P +AKFLKDLCT
Sbjct: 431 PSFPQALHGKKRTNNASEIFEVLKQVKVNIPLLDMIKQVPTYAKFLKDLCT 481


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -1

Query: 176 KYRKNPSFL*RLAMLKKDDNFDEIWEVFKNLTINLPFLDAIKRLPKHAKFLKDLCT 9
           +YR    F  RL   K     ++I E FK + IN+P LDAI+++P +AKFLKDLCT
Sbjct: 455 RYRPVAPFPDRLKPRKNSPQVEKILETFKQVKINIPLLDAIEQIPSYAKFLKDLCT 510


>emb|CAN69614.1| hypothetical protein VITISV_035011 [Vitis vinifera]
          Length = 898

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = -1

Query: 176 KYRKNPSFL*RLAMLKKDDNFDEIWEVFKNLTINLPFLDAIKRLPKHAKFLKDLCT 9
           K R +P FL  L   K   N  EI EV + + +N+P LD IK++P +AKFLKDLCT
Sbjct: 576 KKRTSPHFLQALYGKKGIKNASEILEVLRQVKVNIPLLDMIKQVPSYAKFLKDLCT 631


>gb|ABG37669.1| gag protein [Populus trichocarpa]
          Length = 500

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = -1

Query: 158 SFL*RLAMLKKDDNFDEIWEVFKNLTINLPFLDAIKRLPKHAKFLKDLCT 9
           SF   +   +K ++  EI+E FK + IN+P LDAIK++P +AKFLKDLCT
Sbjct: 82  SFPHAMTKQRKVNHNSEIFETFKQVRINIPLLDAIKQVPSYAKFLKDLCT 131


>gb|ABG37660.1| integrase [Populus trichocarpa]
          Length = 879

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = -1

Query: 131 KKDDNFDEIWEVFKNLTINLPFLDAIKRLPKHAKFLKDLCT 9
           +K ++  EI+E FK++ IN+P LDAIK++P +AKFLKDLCT
Sbjct: 62  RKVNHNSEIFETFKHVRINIPLLDAIKQVPSYAKFLKDLCT 102