BLASTX nr result

ID: Coptis24_contig00010747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010747
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285434.1| PREDICTED: uncharacterized protein KIAA0930 ...    41   7e-08
ref|XP_004142903.1| PREDICTED: uncharacterized protein KIAA0930 ...    42   1e-07

>ref|XP_002285434.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Vitis
           vinifera] gi|302142167|emb|CBI19370.3| unnamed protein
           product [Vitis vinifera]
          Length = 396

 Score = 41.2 bits (95), Expect(2) = 7e-08
 Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   PVQISKRSGIALGTIVRXXXXXXXXXXXXXXXXXX-NRRSDEELLPLQCCLMSIS 162
           PV  SKR G  +GTIVR                    R SDEE+LPL+CCLMSIS
Sbjct: 323 PVHASKR-GFGIGTIVRKAATVASVAAKHAYAAAAATRSSDEEMLPLKCCLMSIS 376



 Score = 40.0 bits (92), Expect(2) = 7e-08
 Identities = 15/20 (75%), Positives = 20/20 (100%)
 Frame = +2

Query: 242 LPWENIAHDILFKGSPPVDL 301
           LPWE+IA+D++FKGSPPV+L
Sbjct: 377 LPWEHIAYDLMFKGSPPVNL 396


>ref|XP_004142903.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Cucumis
           sativus]
          Length = 393

 Score = 42.0 bits (97), Expect(2) = 1e-07
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 242 LPWENIAHDILFKGSPPVDL 301
           LPWE IAHD+LFKGSPPV+L
Sbjct: 374 LPWEYIAHDLLFKGSPPVNL 393



 Score = 38.9 bits (89), Expect(2) = 1e-07
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 10  ISKRSGIALGTIVRXXXXXXXXXXXXXXXXXXNRRSDEELLPLQCCLMSIS 162
           +  ++G  +GTIVR                  +  SD+E++PL+CCLMSIS
Sbjct: 323 VVSKTGFGIGTIVRRAASVATVAARQAYAAASSSSSDDEMIPLKCCLMSIS 373


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