BLASTX nr result
ID: Coptis24_contig00010745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010745
(2804 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera] 232 4e-58
emb|CBI21205.3| unnamed protein product [Vitis vinifera] 231 1e-57
ref|XP_002527612.1| conserved hypothetical protein [Ricinus comm... 220 1e-54
ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|2... 210 1e-51
ref|NP_001105836.1| protein RIK [Zea mays] gi|122211828|sp|Q32SG... 181 4e-51
>ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]
Length = 566
Score = 232 bits (592), Expect = 4e-58
Identities = 137/251 (54%), Positives = 156/251 (62%), Gaps = 1/251 (0%)
Frame = -3
Query: 1668 DQYINHIMNETGATVILRGRGSGNLESLDCEDFQQPLHLFLSCNNPKSVEDAKLLAENLL 1489
DQYINHIMNETGATV LRGRGSGN ES + E QQPLHLFLS NN K +EDAKLLAENLL
Sbjct: 317 DQYINHIMNETGATVSLRGRGSGNSESPNGEG-QQPLHLFLSSNNLKGLEDAKLLAENLL 375
Query: 1488 DTIAAECGASRVSSSKVYKAVPPPPQLMAGVHSSGIDQRVSSVTVPSMAXXXXXXXXXXX 1309
DTI AECGASR SS KVY AVPPP QL+ GV SSG + V + + +A
Sbjct: 376 DTICAECGASRASSCKVYGAVPPPQQLLVGVQSSGNELNVKTSSTACLASSAVSSTPTPL 435
Query: 1308 XXXXXXXXVNGTFPQSAVSQSGGLLGYGQPQPNTVSYTQP-XXXXXXXXXXXXXYPQATP 1132
V+ F Q AVSQ GG GQPQ N V Y P YPQATP
Sbjct: 436 VSPLTVPGVSTGFSQGAVSQCGGFFNSGQPQSNLVCYPPPSLTAGTSYSGYGGIYPQATP 495
Query: 1131 LQQVAFVLKQSSPPVMSVIPPATSAGNTTTKLNSSSSFGSEKLAPQKRKFQELPIASKIP 952
LQQVA L+QS PV S I P+TS+ +T +++S EK PQ+RKFQELP+A K P
Sbjct: 496 LQQVALALRQSPSPVTSTIAPSTSSASTVPMSSAASFSEKEKRLPQRRKFQELPVALKGP 555
Query: 951 TERQQVLQASF 919
T+ QQV +F
Sbjct: 556 TKPQQVFSLTF 566
Score = 195 bits (496), Expect = 5e-47
Identities = 115/203 (56%), Positives = 131/203 (64%), Gaps = 48/203 (23%)
Frame = -3
Query: 2592 RRKKKTMAENS--RPKVSEELTATTTSAKQRKRRKWDEPAEYFISA-------------- 2461
+RK+ M E+S RP S+E +A +QRK+RKWD+PAE +SA
Sbjct: 87 QRKQNNMIEDSCPRPASSDEASAI----RQRKKRKWDQPAESLVSAGVALPGVLPLGNVG 142
Query: 2460 ----------AP----------------------FTANIPQKINLQKIQDELIAREIVIN 2377
AP + I QK+N KIQDELIAREI+IN
Sbjct: 143 PLVGIPLAGVAPPSSALLTNVTIPPVFQTSSIQQHASAIVQKLNQPKIQDELIAREIIIN 202
Query: 2376 DAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETA 2197
DAESTVRYKLTKRQ Q+EIQ+CTGAVVITRGKYRPPN LPD EKPLYLHISAG+HLK+TA
Sbjct: 203 DAESTVRYKLTKRQMQEEIQKCTGAVVITRGKYRPPNALPDGEKPLYLHISAGAHLKDTA 262
Query: 2196 ERIIAVDHAAAMVEEMLKQGQNS 2128
ERI AVD AAAMVEEMLKQGQNS
Sbjct: 263 ERIKAVDRAAAMVEEMLKQGQNS 285
>emb|CBI21205.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 231 bits (588), Expect = 1e-57
Identities = 137/248 (55%), Positives = 155/248 (62%), Gaps = 1/248 (0%)
Frame = -3
Query: 1668 DQYINHIMNETGATVILRGRGSGNLESLDCEDFQQPLHLFLSCNNPKSVEDAKLLAENLL 1489
DQYINHIMNETGATV LRGRGSGN ES + E QQPLHLFLS NN K +EDAKLLAENLL
Sbjct: 283 DQYINHIMNETGATVSLRGRGSGNSESPNGEG-QQPLHLFLSSNNLKGLEDAKLLAENLL 341
Query: 1488 DTIAAECGASRVSSSKVYKAVPPPPQLMAGVHSSGIDQRVSSVTVPSMAXXXXXXXXXXX 1309
DTI AECGASR SS KVY AVPPP QL+ GV SSG + V + + +A
Sbjct: 342 DTICAECGASRASSCKVYGAVPPPQQLLVGVQSSGNELNVKTSSTACLASSAVSSTPTPL 401
Query: 1308 XXXXXXXXVNGTFPQSAVSQSGGLLGYGQPQPNTVSYTQP-XXXXXXXXXXXXXYPQATP 1132
V+ F Q AVSQ GG GQPQ N V Y P YPQATP
Sbjct: 402 VSPLTVPGVSTGFSQGAVSQCGGFFNSGQPQSNLVCYPPPSLTAGTSYSGYGGIYPQATP 461
Query: 1131 LQQVAFVLKQSSPPVMSVIPPATSAGNTTTKLNSSSSFGSEKLAPQKRKFQELPIASKIP 952
LQQVA L+QS PV S I P+TS+ +T +++S EK PQ+RKFQELP+A K P
Sbjct: 462 LQQVALALRQSPSPVTSTIAPSTSSASTVPMSSAASFSEKEKRLPQRRKFQELPVALKGP 521
Query: 951 TERQQVLQ 928
T+ QQ LQ
Sbjct: 522 TKPQQGLQ 529
Score = 198 bits (504), Expect(2) = 6e-54
Identities = 118/217 (54%), Positives = 134/217 (61%), Gaps = 48/217 (22%)
Frame = -3
Query: 2592 RRKKKTMAENS--RPKVSEELTATTTSAKQRKRRKWDEPAEYFISA-------------- 2461
+RK+ M E+S RP S+E +A +QRK+RKWD+PAE +SA
Sbjct: 41 QRKQNNMIEDSCPRPASSDEASAI----RQRKKRKWDQPAESLVSAGVALPGVLPLGNVG 96
Query: 2460 ----------AP----------------------FTANIPQKINLQKIQDELIAREIVIN 2377
AP + I QK+N KIQDELIAREI+IN
Sbjct: 97 PLVGIPLAGVAPPSSALLTNVTIPPVFQTSSIQQHASAIVQKLNQPKIQDELIAREIIIN 156
Query: 2376 DAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETA 2197
DAESTVRYKLTKRQ Q+EIQ+CTGAVVITRGKYRPPN LPD EKPLYLHISAG+HLK+TA
Sbjct: 157 DAESTVRYKLTKRQMQEEIQKCTGAVVITRGKYRPPNALPDGEKPLYLHISAGAHLKDTA 216
Query: 2196 ERIIAVDHAAAMVEEMLKQGQNSHPTSIPFHSTTNVG 2086
ERI AVD AAAMVEEMLKQGQNS H N G
Sbjct: 217 ERIKAVDRAAAMVEEMLKQGQNSESVPSNSHLAGNTG 253
Score = 41.6 bits (96), Expect(2) = 6e-54
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -2
Query: 1990 NACVFLGFDTDPSLNIGSRIRGPNVRF 1910
+ CVFLGF+ DPSLNI + IRGPN ++
Sbjct: 259 STCVFLGFEADPSLNIAACIRGPNDQY 285
>ref|XP_002527612.1| conserved hypothetical protein [Ricinus communis]
gi|223532986|gb|EEF34751.1| conserved hypothetical
protein [Ricinus communis]
Length = 586
Score = 220 bits (561), Expect = 1e-54
Identities = 128/247 (51%), Positives = 149/247 (60%), Gaps = 3/247 (1%)
Frame = -3
Query: 1668 DQYINHIMNETGATVILRGRGSGNLESLDCEDFQQPLHLFLSCNNPKSVEDAKLLAENLL 1489
DQYINHIMNETGATV+L+G GSGN E + QQPLHLFLS NN KS+EDAK LAENLL
Sbjct: 206 DQYINHIMNETGATVVLKGHGSGNFEIPNSGGAQQPLHLFLSANNSKSLEDAKRLAENLL 265
Query: 1488 DTIAAECGASRVSSSKVYKAVPPPPQLMAGVHSSGIDQRVSSVTVPSMAXXXXXXXXXXX 1309
DT++ E GASRVSSSK+Y AVPPP QL+AGV SSG +Q+V+++ +A
Sbjct: 266 DTVSLEFGASRVSSSKIYNAVPPPQQLLAGVQSSGNEQKVNTIPAAGLALSAMSSTPLIP 325
Query: 1308 XXXXXXXXVNGTFPQSAVSQSGGLLGYGQPQPNTVSYTQP-XXXXXXXXXXXXXYPQATP 1132
F Q V Q GGL+ G Q V + QP YPQATP
Sbjct: 326 ASSVAIYRTTPVFSQGTVYQPGGLVNCGSTQSTLVGHPQPLINGGTSYSGYGGIYPQATP 385
Query: 1131 LQQVAFVLKQSSPPVMSVIPPATSAGNT--TTKLNSSSSFGSEKLAPQKRKFQELPIASK 958
LQQVA L+QS+ PV S I P TS NT T +SSS EK Q+RKFQELPI SK
Sbjct: 386 LQQVALALRQSTAPVTSTIAPITSVANTAPTPSTSSSSIPEKEKRPAQRRKFQELPIGSK 445
Query: 957 IPTERQQ 937
P + Q
Sbjct: 446 DPAKSHQ 452
Score = 163 bits (413), Expect = 2e-37
Identities = 86/114 (75%), Positives = 96/114 (84%), Gaps = 6/114 (5%)
Frame = -3
Query: 2445 NIPQ-----KINLQKIQDEL-IAREIVINDAESTVRYKLTKRQTQDEIQRCTGAVVITRG 2284
+IPQ K N KIQDEL IAREIVINDAES++RYKLTKRQT +EIQ+CTGAVVITRG
Sbjct: 52 SIPQITTTTKANQPKIQDELTIAREIVINDAESSIRYKLTKRQTHEEIQKCTGAVVITRG 111
Query: 2283 KYRPPNVLPDSEKPLYLHISAGSHLKETAERIIAVDHAAAMVEEMLKQGQNSHP 2122
KYR PN PD EKPLYLHIS+G+HLK+TAERI+AVD AAAMVEE+LKQG N P
Sbjct: 112 KYRLPNAPPDGEKPLYLHISSGAHLKDTAERILAVDRAAAMVEEILKQGPNLQP 165
>ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|222866900|gb|EEF04031.1|
predicted protein [Populus trichocarpa]
Length = 497
Score = 210 bits (535), Expect = 1e-51
Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 1/245 (0%)
Frame = -3
Query: 1668 DQYINHIMNETGATVILRGRGSGNLESLDCEDFQQPLHLFLSCNNPKSVEDAKLLAENLL 1489
DQYI+HIMNETG TV+LRGRGSGN ES + QQPLHLFLS +NPK +EDAK L+ENLL
Sbjct: 251 DQYISHIMNETGVTVVLRGRGSGNCESQSTGESQQPLHLFLSASNPKGLEDAKRLSENLL 310
Query: 1488 DTIAAECGASRVSSSKVYKAVPPPPQLMAGVHSSGIDQRVSSVTVPSMAXXXXXXXXXXX 1309
DTI+ ECGASR SS KVY AV PPPQ + G H++GI+ ++++ V +
Sbjct: 311 DTISLECGASRASSCKVYNAV-PPPQTLTGAHAAGIEHKLNTSAVTGLMLPTMSSTPPIP 369
Query: 1308 XXXXXXXXVNGTFPQSAVSQSGGLLGYGQPQPNTVSYTQP-XXXXXXXXXXXXXYPQATP 1132
V Q VSQSG +L GQPQP+ Y+QP YPQATP
Sbjct: 370 ASLVSVSGVATVCSQGTVSQSGAMLSCGQPQPSVAGYSQPFVMGGTSYSGYGGIYPQATP 429
Query: 1131 LQQVAFVLKQSSPPVMSVIPPATSAGNTTTKLNSSSSFGSEKLAPQKRKFQELPIASKIP 952
LQQVA VL+Q P+ S + P S N NS + +EK QKRKFQE+P+ SK P
Sbjct: 430 LQQVAQVLRQPPSPIPSTVSPTMSIANAAP--NSGMNSIAEKRPTQKRKFQEVPVGSKGP 487
Query: 951 TERQQ 937
+ Q
Sbjct: 488 AKLHQ 492
Score = 172 bits (436), Expect = 4e-40
Identities = 106/212 (50%), Positives = 128/212 (60%), Gaps = 59/212 (27%)
Frame = -3
Query: 2574 MAENSRPKV-SEELTATT-TSAKQ-------RKRRKWDEPAEYFISAA------------ 2458
M E S ++ +++ TA + TS+ Q R++RKWD+PAE +SA
Sbjct: 1 MVEESSSRIPTDDSTANSDTSSSQSRQSICCRRKRKWDQPAESLVSAGVPVSDAVQLGNV 60
Query: 2457 -------------------------------------PFTANIPQKINLQKIQDELI-AR 2392
TA + K+N K+QDELI AR
Sbjct: 61 GSLVGISLPGAASLSGALLTNPQIAIVPPMFLVPSMPQNTAAVVPKLNQPKVQDELIIAR 120
Query: 2391 EIVINDAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSH 2212
EIVINDAES+VRYKLTKRQTQ+EIQ+ TGAVVITRGKYRPPN PD EKPLYLHISA +H
Sbjct: 121 EIVINDAESSVRYKLTKRQTQEEIQQFTGAVVITRGKYRPPNAPPDGEKPLYLHISAAAH 180
Query: 2211 LKETAERIIAVDHAAAMVEEMLKQGQNSHPTS 2116
LK+TAERI+AVD AAAMV+EMLKQGQ+S P S
Sbjct: 181 LKDTAERILAVDRAAAMVDEMLKQGQSSQPAS 212
>ref|NP_001105836.1| protein RIK [Zea mays] gi|122211828|sp|Q32SG5.1|RIK_MAIZE RecName:
Full=Protein RIK; AltName: Full=Rough sheath
2-interacting KH domain protein; Short=RS2-interacting KH
domain protein gi|62997479|gb|AAY24682.1| ROUGH
SHEATH2-interacting KH-domain protein [Zea mays]
Length = 616
Score = 181 bits (460), Expect(2) = 4e-51
Identities = 102/212 (48%), Positives = 128/212 (60%), Gaps = 52/212 (24%)
Frame = -3
Query: 2574 MAENSRPKVSEELTATTTSAKQRKRRKWDEPAEYFISAA--------------------- 2458
M E+ KV++E A+ + +RK+RKWD+PAE +SAA
Sbjct: 1 MTEDRAHKVADEPAASGRQSPERKKRKWDQPAEDLVSAAVTAAAVSGMPVMNFGALPGVV 60
Query: 2457 ----------------PFTANIP---------------QKINLQKIQDELIAREIVINDA 2371
P ++P QK++ KI DE+IAREIVINDA
Sbjct: 61 LPGVTAYGAATLPSVVPVPYSLPPHIAPSVLQNAAAAAQKLSQAKIPDEVIAREIVINDA 120
Query: 2370 ESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETAER 2191
+ +VRYKLTKRQTQ+EIQ+CT V+ITRGKY PPN+LPD EKPLYLHISAGS LK+TAER
Sbjct: 121 DPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLPDGEKPLYLHISAGSQLKDTAER 180
Query: 2190 IIAVDHAAAMVEEMLKQGQNSHPTSIPFHSTT 2095
I AVD AA+M+EE+LKQG S S+PF S+T
Sbjct: 181 IKAVDRAASMIEEILKQGTTSESISVPFSSST 212
Score = 49.3 bits (116), Expect(2) = 4e-51
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -2
Query: 2008 QVSHPFNACVFLGFDTDPSLNIGSRIRGPNVRF 1910
Q PF+A VFLGFD DPSLNI +RIRGPN ++
Sbjct: 214 QAVRPFSASVFLGFDADPSLNITARIRGPNDQY 246
Score = 168 bits (426), Expect = 6e-39
Identities = 107/250 (42%), Positives = 137/250 (54%), Gaps = 1/250 (0%)
Frame = -3
Query: 1668 DQYINHIMNETGATVILRGRGSGNLESLDCEDFQQPLHLFLSCNNPKSVEDAKLLAENLL 1489
DQYINHIM ETG TV+LRG+ S NL S E QQPLHL+L+ + K++E AK+LAENLL
Sbjct: 244 DQYINHIMKETGVTVVLRGKDSENLGSCHSEASQQPLHLYLTSMHLKNLEAAKVLAENLL 303
Query: 1488 DTIAAECGASRVSSSKVYKAVPPPPQLMAGVHSSGIDQRVSSVTVPSMAXXXXXXXXXXX 1309
DT+AAE GASR+SSSKVY AVPPP QL+AGV +SG V + P++
Sbjct: 304 DTVAAEFGASRISSSKVYGAVPPPQQLLAGVDTSGTKSDVHYIVGPNVLSGATHSFASTG 363
Query: 1308 XXXXXXXXVNGTFPQSAVSQSGGLLGYGQPQPNTVSY-TQPXXXXXXXXXXXXXYPQATP 1132
+ QSG G P P+ ++Y P YPQATP
Sbjct: 364 VIAP-------VVAPAVTVQSGAPTYSGVPLPSNMAYPIPPANGGAFYSGYGDIYPQATP 416
Query: 1131 LQQVAFVLKQSSPPVMSVIPPATSAGNTTTKLNSSSSFGSEKLAPQKRKFQELPIASKIP 952
LQQ+AF LK +S +P ++ + TK NS +K + +RKFQELP++
Sbjct: 417 LQQLAFTLKHASSSATQAVPVTSTPTSMATKGNSILDAEMDKRS--RRKFQELPVSKGPA 474
Query: 951 TERQQVLQAS 922
TE Q Q S
Sbjct: 475 TESQNSQQGS 484