BLASTX nr result
ID: Coptis24_contig00010740
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010740 (719 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 290 2e-76 ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 290 2e-76 ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 288 8e-76 ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 288 8e-76 ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [S... 283 3e-74 >ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog, partial [Cucumis sativus] Length = 780 Score = 290 bits (742), Expect = 2e-76 Identities = 151/216 (69%), Positives = 172/216 (79%), Gaps = 5/216 (2%) Frame = +1 Query: 85 GVYIPPFMLRKQDNNVSDYDKSSLAYQRLTWDALGKTINGLVNKVNATNIKNIVPELIQE 264 GVYIPPF L + V D KSS+ YQRLTWDAL K+INGLVNKVNATNIKNI+PEL E Sbjct: 223 GVYIPPFKLARMMKEVQD--KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 280 Query: 265 NLIRGRGLFCRSIIKSQLASPRFTHVFSALVSVLNTKFPQXXXXXXXXXXXXXXXAYKRN 444 NLIRGRGLFCRS +KSQ+ASP FT VF+ALV+V+NTKFP+ AYKRN Sbjct: 281 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRN 340 Query: 445 DKPQLLAVTDFIAQLVNHEV-----ALELLTILLDDPSEDSVEVAVRFVTRCGSLLQDLS 609 DKPQLLA FIA LVN +V ALELLT+LL++P++DSVEVAV FVT CGS+L+DLS Sbjct: 341 DKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLS 400 Query: 610 PKALHGIFERFRGILHEGQINKRVQFLIEGLFALRK 717 PK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RK Sbjct: 401 PKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRK 436 >ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus] Length = 797 Score = 290 bits (742), Expect = 2e-76 Identities = 151/216 (69%), Positives = 172/216 (79%), Gaps = 5/216 (2%) Frame = +1 Query: 85 GVYIPPFMLRKQDNNVSDYDKSSLAYQRLTWDALGKTINGLVNKVNATNIKNIVPELIQE 264 GVYIPPF L + V D KSS+ YQRLTWDAL K+INGLVNKVNATNIKNI+PEL E Sbjct: 223 GVYIPPFKLARMMKEVQD--KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 280 Query: 265 NLIRGRGLFCRSIIKSQLASPRFTHVFSALVSVLNTKFPQXXXXXXXXXXXXXXXAYKRN 444 NLIRGRGLFCRS +KSQ+ASP FT VF+ALV+V+NTKFP+ AYKRN Sbjct: 281 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRN 340 Query: 445 DKPQLLAVTDFIAQLVNHEV-----ALELLTILLDDPSEDSVEVAVRFVTRCGSLLQDLS 609 DKPQLLA FIA LVN +V ALELLT+LL++P++DSVEVAV FVT CGS+L+DLS Sbjct: 341 DKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLS 400 Query: 610 PKALHGIFERFRGILHEGQINKRVQFLIEGLFALRK 717 PK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RK Sbjct: 401 PKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRK 436 >ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 860 Score = 288 bits (737), Expect = 8e-76 Identities = 150/216 (69%), Positives = 170/216 (78%), Gaps = 5/216 (2%) Frame = +1 Query: 85 GVYIPPFMLRKQDNNVSDYDKSSLAYQRLTWDALGKTINGLVNKVNATNIKNIVPELIQE 264 GVYIPPF + V D KSS+ YQRLTWDAL K+INGLVNKVNATNIKNI+PEL E Sbjct: 286 GVYIPPFKMAMMMKEVQD--KSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 343 Query: 265 NLIRGRGLFCRSIIKSQLASPRFTHVFSALVSVLNTKFPQXXXXXXXXXXXXXXXAYKRN 444 NLIRGRGLFCRS +KSQ+ASP FT VF+ALV+V+NTKFP+ AYKRN Sbjct: 344 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRN 403 Query: 445 DKPQLLAVTDFIAQLVNHE-----VALELLTILLDDPSEDSVEVAVRFVTRCGSLLQDLS 609 DKPQLLA FIA LVN + +ALELLT+LL+ P++DSVEVAV FVT CGS+LQDLS Sbjct: 404 DKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLS 463 Query: 610 PKALHGIFERFRGILHEGQINKRVQFLIEGLFALRK 717 PK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RK Sbjct: 464 PKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRK 499 >ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 871 Score = 288 bits (737), Expect = 8e-76 Identities = 150/216 (69%), Positives = 170/216 (78%), Gaps = 5/216 (2%) Frame = +1 Query: 85 GVYIPPFMLRKQDNNVSDYDKSSLAYQRLTWDALGKTINGLVNKVNATNIKNIVPELIQE 264 GVYIPPF + V D KSS+ YQRLTWDAL K+INGLVNKVNATNIKNI+PEL E Sbjct: 302 GVYIPPFKMAMMMKEVQD--KSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 359 Query: 265 NLIRGRGLFCRSIIKSQLASPRFTHVFSALVSVLNTKFPQXXXXXXXXXXXXXXXAYKRN 444 NLIRGRGLFCRS +KSQ+ASP FT VF+ALV+V+NTKFP+ AYKRN Sbjct: 360 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRN 419 Query: 445 DKPQLLAVTDFIAQLVNHE-----VALELLTILLDDPSEDSVEVAVRFVTRCGSLLQDLS 609 DKPQLLA FIA LVN + +ALELLT+LL+ P++DSVEVAV FVT CGS+LQDLS Sbjct: 420 DKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLS 479 Query: 610 PKALHGIFERFRGILHEGQINKRVQFLIEGLFALRK 717 PK LHGIFERFRGILHEG+I+KRVQFLIEGLFA+RK Sbjct: 480 PKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRK 515 >ref|XP_002456069.1| hypothetical protein SORBIDRAFT_03g029810 [Sorghum bicolor] gi|241928044|gb|EES01189.1| hypothetical protein SORBIDRAFT_03g029810 [Sorghum bicolor] Length = 792 Score = 283 bits (723), Expect = 3e-74 Identities = 149/216 (68%), Positives = 172/216 (79%), Gaps = 5/216 (2%) Frame = +1 Query: 85 GVYIPPFMLRKQDNNVSDYDKSSLAYQRLTWDALGKTINGLVNKVNATNIKNIVPELIQE 264 G+YIPPF + + +V D KSS YQRLTWDAL K+INGLVNKVNATNIKNIVPEL E Sbjct: 221 GIYIPPFRMAQMMRDVED--KSSPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAE 278 Query: 265 NLIRGRGLFCRSIIKSQLASPRFTHVFSALVSVLNTKFPQXXXXXXXXXXXXXXXAYKRN 444 NL+RGRGLFC+S IKSQ+ASP FT VF+ALV+V+NTKFP+ AYKRN Sbjct: 279 NLVRGRGLFCQSCIKSQMASPGFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRN 338 Query: 445 DKPQLLAVTDFIAQLVN----HE-VALELLTILLDDPSEDSVEVAVRFVTRCGSLLQDLS 609 DKPQLLA T FIA LVN HE VALELLT+LL++P++DSVEVAV FV CG++LQDLS Sbjct: 339 DKPQLLAATKFIAHLVNQVVAHELVALELLTVLLENPTDDSVEVAVGFVKECGAMLQDLS 398 Query: 610 PKALHGIFERFRGILHEGQINKRVQFLIEGLFALRK 717 P+ LH IFERFRGILHEG+I+KRVQFLIEGLFA+RK Sbjct: 399 PQGLHAIFERFRGILHEGEIDKRVQFLIEGLFAIRK 434