BLASTX nr result

ID: Coptis24_contig00010737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010737
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO86797.1| cyclin [Camellia sinensis]                              77   1e-12
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...    77   1e-12
ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like...    73   3e-11
ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycin...    70   1e-10

>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/97 (43%), Positives = 51/97 (52%)
 Frame = -3

Query: 293 DCVIIDVENDNMSGDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXDIDCGDSENPL 114
           DC IIDV++   +GDS VPM+V+HTEA                       ID  D  NPL
Sbjct: 120 DCSIIDVDDYKAAGDSPVPMFVQHTEAMLEEIDRMEVEMEDTTDDPVDD-IDTSDKRNPL 178

Query: 113 AVVEYVEDIYXXXXXXXXXXXXSPNYMAQQYDINERM 3
           AVVEY++DIY             PNY+ QQ+DINERM
Sbjct: 179 AVVEYIDDIYAYYKKVESSSCVLPNYIGQQFDINERM 215


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
           cyclin B, putative [Ricinus communis]
          Length = 438

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/103 (43%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 SEPEEDCVIIDVENDNMS-GDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXDIDCG 132
           S   EDC IID E+ N + GD SVPM+V+HTEA                      DID  
Sbjct: 112 SSDPEDCTIIDAEDYNKTNGDFSVPMFVQHTEAMLEEIDRMEEVEMEDVVEEPFMDIDSY 171

Query: 131 DSENPLAVVEYVEDIYXXXXXXXXXXXXSPNYMAQQYDINERM 3
           D +NPLAVVEY++D+Y              NYM+QQ DINERM
Sbjct: 172 DKKNPLAVVEYIDDLYNFYRKAELSSCAPSNYMSQQSDINERM 214


>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/102 (44%), Positives = 53/102 (51%)
 Frame = -3

Query: 308 SEPEEDCVIIDVENDNMSGDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXDIDCGD 129
           SEPE DC IIDVE    S D S P +V+HTEA                      DID  D
Sbjct: 112 SEPE-DCNIIDVEGYKTSDDFSAPTFVQHTEAMLEEIDRMDEVEMEDVEEEPVLDIDGCD 170

Query: 128 SENPLAVVEYVEDIYXXXXXXXXXXXXSPNYMAQQYDINERM 3
             +PLAVVEY++D+Y             PNYMAQQ+DIN+RM
Sbjct: 171 KRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRM 212


>ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 406

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -3

Query: 293 DCVIIDVENDNMSG-DSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXDIDCGDSENP 117
           DC I+D+++D+  G D +VP++VKHTEA                      DID  D ++P
Sbjct: 87  DCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDP 146

Query: 116 LAVVEYVEDIYXXXXXXXXXXXXSPNYMAQQYDINERM 3
           LAVVEY++DIY            SPNYM  Q DINERM
Sbjct: 147 LAVVEYIDDIYSFYKDIENSSCVSPNYMTSQLDINERM 184


>ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycine max]
           gi|255635303|gb|ACU18005.1| unknown [Glycine max]
          Length = 415

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -3

Query: 293 DCVIIDVENDNMSG-DSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXDIDCGDSENP 117
           DC I+D+++D+  G D +VP++VKHTEA                      DID  D ++ 
Sbjct: 96  DCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDT 155

Query: 116 LAVVEYVEDIYXXXXXXXXXXXXSPNYMAQQYDINERM 3
           LAVVEY++DIY            SPNYM  Q+DINERM
Sbjct: 156 LAVVEYIDDIYSFYKDIENSSRVSPNYMNSQFDINERM 193


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