BLASTX nr result

ID: Coptis24_contig00010731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010731
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272446.1| PREDICTED: NAC domain-containing protein 8 [...    61   1e-07
ref|XP_004156732.1| PREDICTED: NAC domain-containing protein 8-l...    56   4e-06
ref|XP_004142846.1| PREDICTED: NAC domain-containing protein 8-l...    56   4e-06
ref|XP_003554828.1| PREDICTED: NAC domain-containing protein 8-l...    55   6e-06
ref|XP_002298550.1| NAC domain protein, IPR003441 [Populus trich...    55   8e-06

>ref|XP_002272446.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
           gi|296087593|emb|CBI34849.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = -3

Query: 370 ATDSQVPEDLDSNNINALLLCNEILDTNEPINEFELKNDHYFVCSDSNKDYLFNGDSKTS 191
           A +SQ  ED D N ++  LLC EI     P   ++   +H  V   S+      GD    
Sbjct: 304 AGESQAIEDADQNGLHDSLLCKEIFYPGAP--HYDTGLNHGPVIGFSHNMNGIPGDHNAP 361

Query: 190 CETKGGYWGISDLGNLEFETPPDFDLANMQFDSQEIFTSLFDR 62
           C       GI+DL NLE +TPPDF LA++QF SQ+      DR
Sbjct: 362 C-------GIADLENLELDTPPDFQLADLQFGSQDSIFGWLDR 397


>ref|XP_004156732.1| PREDICTED: NAC domain-containing protein 8-like [Cucumis sativus]
          Length = 518

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/103 (37%), Positives = 56/103 (54%)
 Frame = -3

Query: 370 ATDSQVPEDLDSNNINALLLCNEILDTNEPINEFELKNDHYFVCSDSNKDYLFNGDSKTS 191
           A +SQ   D + + +   LLCNE+LD++  I+  ++ N   F  S SN  +    D+   
Sbjct: 424 AGESQDIADGELHYLEDNLLCNEVLDSSALISNNQV-NQIPFPLSGSNAYHEIANDN-VP 481

Query: 190 CETKGGYWGISDLGNLEFETPPDFDLANMQFDSQEIFTSLFDR 62
           C       GI+DL NL+ +TPPDF LA++QF SQE      DR
Sbjct: 482 C-------GIADLENLDLDTPPDFHLADLQFGSQESIFDWIDR 517


>ref|XP_004142846.1| PREDICTED: NAC domain-containing protein 8-like [Cucumis sativus]
          Length = 518

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/103 (37%), Positives = 56/103 (54%)
 Frame = -3

Query: 370 ATDSQVPEDLDSNNINALLLCNEILDTNEPINEFELKNDHYFVCSDSNKDYLFNGDSKTS 191
           A +SQ   D + + +   LLCNE+LD++  I+  ++ N   F  S SN  +    D+   
Sbjct: 424 AGESQDIADGELHYLEDNLLCNEVLDSSALISNNQV-NQIPFPLSGSNAYHEIANDN-VP 481

Query: 190 CETKGGYWGISDLGNLEFETPPDFDLANMQFDSQEIFTSLFDR 62
           C       GI+DL NL+ +TPPDF LA++QF SQE      DR
Sbjct: 482 C-------GIADLENLDLDTPPDFHLADLQFGSQESIFDWIDR 517


>ref|XP_003554828.1| PREDICTED: NAC domain-containing protein 8-like [Glycine max]
          Length = 429

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
 Frame = -3

Query: 346 DLDSNNINALLLCNEILDTNEPINEFELKNDHYFVCSDSNKDYLFNGDSKTSC------E 185
           D D + +  +LLC EIL ++  +N   L +              FNGD+K +        
Sbjct: 341 DCDFDGLEDILLCKEILQSSALLNHSGLTST-------------FNGDAKANKLVAPGNN 387

Query: 184 TKGGYWGISDLGNLEFETPPDFDLANMQFDSQE 86
              G +G+S L  LE +TPPDFDL+N+QF SQ+
Sbjct: 388 NDYGSYGVSVLDTLELDTPPDFDLSNLQFGSQD 420


>ref|XP_002298550.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222845808|gb|EEE83355.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 374

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = -3

Query: 370 ATDSQVPEDLDSNNINALLLCNEILDT--NEPINEFELKNDHYFVCSDSNKDYLFNGDSK 197
           A +SQ  E+ D   ++  LLCNEI  +    P N    +  +  +  ++N+    NG++ 
Sbjct: 279 AGESQAVENSDFTALDDSLLCNEIFVSAPRVPNNSGVNRVSYTGMAHNTNE---VNGNNN 335

Query: 196 TSCETKGGYWGISDLGNLEFETPPDFDLANMQFDSQEIFTSLFDR 62
             C       GI++L NLE +TPPDF LA++QF SQE      DR
Sbjct: 336 EPC-------GIAELENLELDTPPDFQLADLQFGSQESILGWLDR 373


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