BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010720
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]   196   5e-48
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...   190   2e-46
ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-contain...   169   4e-40
ref|XP_002511460.1| F-box and wd40 domain protein, putative [Ric...   168   1e-39
ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protei...   163   3e-38

>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score =  196 bits (497), Expect = 5e-48
 Identities = 108/206 (52%), Positives = 136/206 (66%), Gaps = 16/206 (7%)
 Frame = -1

Query: 589 PPPTQLPHSLQIPKKKNMGIIPCSLPCHSDKNSQSH---------------SSHFYSDHS 455
           PP +    SL    ++ MG + C L CH +K SQS                SS  +S+ S
Sbjct: 66  PPSSSAAFSLSKGLREKMGFLRCPLSCHREKESQSRAQAQAQAQAHHLHSDSSCLHSESS 125

Query: 454 TSFSSQPSLASVPSLASKSSQIQEQLSLTHYQCISTLKGHSSYVSSLTLSGKYLYSGSSN 275
            S +SQPSL SVPSL S+S +  EQ   TH+ CISTLKGHSSYV SL L+GK+LYSGSS+
Sbjct: 126 NSLASQPSLPSVPSLTSQSRR-HEQXITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSD 184

Query: 274 QEIRVWNHEPLNSDPIHHDDNVVAIRNGAVKSLVILGNTLFSAHQDNKIRVWQIDDDM-N 98
           +EIR+W  +P   +    +DN VA+ NGAVKSLV+LG+ LFSAHQD KIRVW++D+D  +
Sbjct: 185 KEIRIWXRDPSRLE--XSNDNGVALGNGAVKSLVVLGDKLFSAHQDQKIRVWKVDNDXPH 242

Query: 97  QKYKKLATLPTLGDRVMKLLPPKNYV 20
           QKYK +ATLPTL DR +KL    NYV
Sbjct: 243 QKYKCMATLPTLSDRALKLFSASNYV 268


>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score =  190 bits (483), Expect = 2e-46
 Identities = 104/191 (54%), Positives = 130/191 (68%), Gaps = 18/191 (9%)
 Frame = -1

Query: 538 MGIIPCSLPCHSDKNSQSH-----------------SSHFYSDHSTSFSSQPSLASVPSL 410
           MG + C L CH +K SQS                  SS  +S+ S S +SQPSL SVPSL
Sbjct: 1   MGFLRCPLSCHKEKESQSRAQAQAQAQAQAHHLHSDSSCLHSESSNSLASQPSLPSVPSL 60

Query: 409 ASKSSQIQEQLSLTHYQCISTLKGHSSYVSSLTLSGKYLYSGSSNQEIRVWNHEPLNSDP 230
            S+S +  EQ   TH+ CISTLKGHSSYV SL L+GK+LYSGSS++EIR+W+ +P   + 
Sbjct: 61  TSQSRR-HEQAITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWSRDPSRLET 119

Query: 229 IHHDDNVVAIRNGAVKSLVILGNTLFSAHQDNKIRVWQIDDDM-NQKYKKLATLPTLGDR 53
              +DN VA+ NGAVKSLV+LG+ LFSAHQD KIRVW++D+D  +QKYK +ATLPTL DR
Sbjct: 120 --SNDNGVALGNGAVKSLVVLGDKLFSAHQDQKIRVWKVDNDSPHQKYKCMATLPTLSDR 177

Query: 52  VMKLLPPKNYV 20
            +KL    NYV
Sbjct: 178 ALKLFSASNYV 188


>ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 409

 Score =  169 bits (429), Expect = 4e-40
 Identities = 97/179 (54%), Positives = 126/179 (70%), Gaps = 6/179 (3%)
 Frame = -1

Query: 538 MGIIPCSLPCHSDKNSQSHSSHFYSDHSTSFSSQPSLASVPSLASKSSQIQEQL--SLTH 365
           MGI+    P HS   S S   H  S+   S SSQPSL SVPSL S++ Q Q  L  + T 
Sbjct: 1   MGIMSAHQPSHSGDYSASQFFHVQSE-LISLSSQPSLPSVPSLTSQTQQQQLYLPSTTTT 59

Query: 364 YQCISTLKGHSSYVSSLTLSGKYLYSGSSNQEIRVWNHEPLNSDPIHHD--DNVVAIRNG 191
           + C++T KGH+SYVSSL L+G +L+SGSS++EIR+W    LNS+  H +  +NVVA+  G
Sbjct: 60  HHCVTTFKGHTSYVSSLALAGNFLFSGSSDKEIRLWEQN-LNSELDHENISNNVVAVGKG 118

Query: 190 AVKSLVILGNTLFSAHQDNKIRVWQIDDD--MNQKYKKLATLPTLGDRVMKLLPPKNYV 20
           AVKS+V+LG+ LFSAHQD+KIRVW+I+D    +QK  +LATLPTLGDR +KLL P N+V
Sbjct: 119 AVKSMVVLGDKLFSAHQDHKIRVWKINDQDPHHQKCTRLATLPTLGDRAIKLLTPNNHV 177


>ref|XP_002511460.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223550575|gb|EEF52062.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 401

 Score =  168 bits (425), Expect = 1e-39
 Identities = 94/171 (54%), Positives = 120/171 (70%), Gaps = 8/171 (4%)
 Frame = -1

Query: 508 HSDKNSQSHSSHFYSDHSTSFSSQPSLASVPSLASKSSQIQEQLSLTHYQCISTLKGHSS 329
           HS+ +SQS+S+        SFSSQPSL S+PSL S         S  H+ C++TLKGH++
Sbjct: 4   HSEYDSQSYSN------LPSFSSQPSLQSLPSLTSDRQYFLSTTSRQHH-CLATLKGHTT 56

Query: 328 YVSSLTLSGKYLYSGSSNQEIRVWNHEPLNSDPIHHD---DNVVAIRNGAVKSLVILGNT 158
           Y+SSLTL+GK+LYSGSS++EIR WN  PL+S+ I  +   ++VVA   GAVKSLV+L + 
Sbjct: 57  YISSLTLAGKFLYSGSSDKEIRSWNRNPLDSEVIDQENLCNSVVAAGKGAVKSLVVLADK 116

Query: 157 LFSAHQDNKIRVWQI-----DDDMNQKYKKLATLPTLGDRVMKLLPPKNYV 20
           LFSAHQD+KIRVW+I     D+   QKY  LATLPTLGDR  K+L PKN V
Sbjct: 117 LFSAHQDHKIRVWRISSQELDNQHQQKYTHLATLPTLGDRAFKILLPKNQV 167


>ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Glycine
           max]
          Length = 421

 Score =  163 bits (413), Expect = 3e-38
 Identities = 93/168 (55%), Positives = 116/168 (69%), Gaps = 9/168 (5%)
 Frame = -1

Query: 496 NSQSHSSHFYSDHST--SFSSQPSLASVPSLASKSSQIQEQLSLTHYQCISTLKGH-SSY 326
           +S SHS+H     +T  S SSQ SL SVPSL +    +    S  ++ C++TLKGH SSY
Sbjct: 13  SSSSHSNHHQQGSTTPKSLSSQRSLVSVPSL-NHHHHLHTPNSTVYHHCLTTLKGHTSSY 71

Query: 325 VSSLTLSGKYLYSGSSNQEIRVWNHEPLNSDPIHHDDNVVAIRNGAVKSLVILGNTLFSA 146
           +SSLTLSGK+LY+GSS++EIR WN  P NS   +++ N V   NGAVKSLVI  N LFSA
Sbjct: 72  ISSLTLSGKFLYTGSSDREIRSWNRIPENSSNNNNNSNTVLTGNGAVKSLVIQSNKLFSA 131

Query: 145 HQDNKIRVWQI------DDDMNQKYKKLATLPTLGDRVMKLLPPKNYV 20
           HQD+KIRVW+I      D+D +QKY  +ATLPTLGDR  K+L PKN V
Sbjct: 132 HQDHKIRVWKISTNNNNDNDHDQKYTHVATLPTLGDRASKILIPKNQV 179