BLASTX nr result
ID: Coptis24_contig00010719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010719
(563 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFC90236.1| nucleotide-binding site leucine-rich repeat prote... 152 5e-35
ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27... 150 1e-34
emb|CBI26623.3| unnamed protein product [Vitis vinifera] 150 1e-34
gb|AFC90367.1| nucleotide-binding site leucine-rich repeat prote... 150 2e-34
gb|AFC90357.1| nucleotide-binding site leucine-rich repeat prote... 150 2e-34
>gb|AFC90236.1| nucleotide-binding site leucine-rich repeat protein, partial
[Rhododendron formosanum]
Length = 295
Score = 152 bits (383), Expect = 5e-35
Identities = 81/187 (43%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Frame = +3
Query: 3 KKEKLFNEFVSVVVSQKPDLEKIQDAIAEKLDLKLKGESLS-SRAAELRERLNQERKTLL 179
KK+ LF E V VVSQ + KIQ +A++L+LKL+ E RA +L RL ER+ L+
Sbjct: 17 KKDGLFGEVVMAVVSQDAKVAKIQGVLADRLNLKLEAELTEVGRANKLWNRLKNERRNLV 76
Query: 180 CLDDVWEPLDLVKVGIPYKNAGNRCKVIFTARDQGVCERMEMDKKIEVKVLLEEDSWNLF 359
LDD+W+ LDL ++GIP + CKV+ T+R+Q V + M++DK ++VL EE++WNLF
Sbjct: 77 ILDDIWKKLDLKEIGIPITDGNKGCKVVLTSRNQRVFKDMDIDKDFPIEVLSEEEAWNLF 136
Query: 360 RSKAGIVVDV-PLFKTVAENIVKECKGLPMAIVTLGSALRNNKNIAVWDDTLARLKKSIS 536
+ K G VD + VA + +EC+GLP+AI+ +G+AL+ K+I W +L +LKKS+
Sbjct: 137 KKKIGNNVDSHDQLRHVANEVCRECRGLPVAILAVGAALK-GKSIDDWTSSLDKLKKSML 195
Query: 537 KDMEPVN 557
D+E ++
Sbjct: 196 NDIEDID 202
>ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
vinifera]
Length = 1144
Score = 150 bits (379), Expect = 1e-34
Identities = 84/187 (44%), Positives = 114/187 (60%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 KKEKLFNEFVSVVVSQKPDLEKIQDAIAEKLDLKLKGESLSSRAAELRERLNQERKTLLC 182
KK+KLF+E VVSQ PDL KIQD IA+ L L+ E RA LRERL E++ L+
Sbjct: 195 KKDKLFDEVAIAVVSQAPDLIKIQDEIADALGLEFHEEKEIGRAGRLRERLKTEKRVLVI 254
Query: 183 LDDVWEPLDLVKVGIPYKNAGNRCKVIFTARDQGVCERM-EMDKKIEVKVLLEEDSWNLF 359
LDDVWE LDL +GIP+ CK++ T R + C M KI + +L E++SW LF
Sbjct: 255 LDDVWERLDLGAIGIPHGVDHRGCKILLTTRREHTCNVMGSQATKILLNILNEQESWALF 314
Query: 360 RSKAGIVVDVPLFKTVAENIVKECKGLPMAIVTLGSALRNNKNIAVWDDTLARLKKSISK 539
RS AG VD P VA I K+C GLP+A+V +G AL ++K+I W + +LK+
Sbjct: 315 RSNAGATVDSPAVNVVATEIAKKCGGLPLALVAVGRAL-SDKDIDGWQEAAKQLKECKPM 373
Query: 540 DMEPVNA 560
+++ V+A
Sbjct: 374 NIQDVDA 380
>emb|CBI26623.3| unnamed protein product [Vitis vinifera]
Length = 1940
Score = 150 bits (379), Expect = 1e-34
Identities = 84/187 (44%), Positives = 114/187 (60%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 KKEKLFNEFVSVVVSQKPDLEKIQDAIAEKLDLKLKGESLSSRAAELRERLNQERKTLLC 182
KK+KLF+E VVSQ PDL KIQD IA+ L L+ E RA LRERL E++ L+
Sbjct: 18 KKDKLFDEVAIAVVSQAPDLIKIQDEIADALGLEFHEEKEIGRAGRLRERLKTEKRVLVI 77
Query: 183 LDDVWEPLDLVKVGIPYKNAGNRCKVIFTARDQGVCERM-EMDKKIEVKVLLEEDSWNLF 359
LDDVWE LDL +GIP+ CK++ T R + C M KI + +L E++SW LF
Sbjct: 78 LDDVWERLDLGAIGIPHGVDHRGCKILLTTRREHTCNVMGSQATKILLNILNEQESWALF 137
Query: 360 RSKAGIVVDVPLFKTVAENIVKECKGLPMAIVTLGSALRNNKNIAVWDDTLARLKKSISK 539
RS AG VD P VA I K+C GLP+A+V +G AL ++K+I W + +LK+
Sbjct: 138 RSNAGATVDSPAVNVVATEIAKKCGGLPLALVAVGRAL-SDKDIDGWQEAAKQLKECKPM 196
Query: 540 DMEPVNA 560
+++ V+A
Sbjct: 197 NIQDVDA 203
Score = 76.3 bits (186), Expect = 3e-12
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 KLDLKLKGESLSSRAAELRERLNQERKTLLCLDDVWEPLDLVKVGIPYKNAGNRCKVIFT 269
K +K+ + + L ERL E++ L+ LDDVW+ LDL +GIP+ CK++ T
Sbjct: 1232 KARVKISKQDDHEKTKSLCERLKMEKRILIILDDVWKILDLAAIGIPHGVDHKGCKILLT 1291
Query: 270 ARDQGVCERM-EMDKKIEVKVLLEEDSWNLFRSKAGIVVDVP 392
R + VC M K+ + +L E++SW LFRS AG +VD P
Sbjct: 1292 TRLEHVCNVMGGQATKLLLNILDEQESWALFRSNAGAIVDSP 1333
>gb|AFC90367.1| nucleotide-binding site leucine-rich repeat protein, partial
[Rhododendron formosanum] gi|379068034|gb|AFC90370.1|
nucleotide-binding site leucine-rich repeat protein,
partial [Rhododendron formosanum]
Length = 251
Score = 150 bits (378), Expect = 2e-34
Identities = 80/184 (43%), Positives = 116/184 (63%)
Frame = +3
Query: 3 KKEKLFNEFVSVVVSQKPDLEKIQDAIAEKLDLKLKGESLSSRAAELRERLNQERKTLLC 182
K+EKLF++ V VSQ D KIQ IA+ L K + ES S RA LR +L Q+ + L+
Sbjct: 7 KEEKLFDDVVMATVSQNLDARKIQGEIADLLGFKFEQESDSGRADVLRGQLKQKARILVI 66
Query: 183 LDDVWEPLDLVKVGIPYKNAGNRCKVIFTARDQGVCERMEMDKKIEVKVLLEEDSWNLFR 362
LDDVW+ +L +GIP+ + RCK++ T+R + VC M KKI V++L +E++WNLF+
Sbjct: 67 LDDVWKRFELNDIGIPFGDDHKRCKILVTSRSEEVCNDMGAQKKIPVQILHKEEAWNLFK 126
Query: 363 SKAGIVVDVPLFKTVAENIVKECKGLPMAIVTLGSALRNNKNIAVWDDTLARLKKSISKD 542
AGI+ D F++ + EC GLP+AIVT+ AL+ +K + WD L L+KSI K+
Sbjct: 127 EMAGILEDDTNFQSTKMAVANECGGLPIAIVTVSRALK-DKGKSSWDSALEALRKSIGKN 185
Query: 543 MEPV 554
+ V
Sbjct: 186 VREV 189
>gb|AFC90357.1| nucleotide-binding site leucine-rich repeat protein, partial
[Rhododendron formosanum]
Length = 251
Score = 150 bits (378), Expect = 2e-34
Identities = 80/184 (43%), Positives = 116/184 (63%)
Frame = +3
Query: 3 KKEKLFNEFVSVVVSQKPDLEKIQDAIAEKLDLKLKGESLSSRAAELRERLNQERKTLLC 182
K+EKLF++ V VSQ D KIQ IA+ L K + ES S RA LR +L Q+ + L+
Sbjct: 7 KEEKLFDDVVMATVSQNLDARKIQGEIADLLGFKFEQESDSGRADVLRGQLKQKARILVI 66
Query: 183 LDDVWEPLDLVKVGIPYKNAGNRCKVIFTARDQGVCERMEMDKKIEVKVLLEEDSWNLFR 362
LDDVW+ +L +GIP+ + RCK++ T+R + VC M KKI V++L +E++WNLF+
Sbjct: 67 LDDVWKRFELNDIGIPFGDDHKRCKILVTSRSEEVCNDMGAQKKIPVQILHKEEAWNLFK 126
Query: 363 SKAGIVVDVPLFKTVAENIVKECKGLPMAIVTLGSALRNNKNIAVWDDTLARLKKSISKD 542
AGI+ D F++ + EC GLP+AIVT+ AL+ +K + WD L L+KSI K+
Sbjct: 127 EMAGILEDDTNFQSTKMAVANECGGLPIAIVTVSRALK-DKGKSSWDSALEALRKSIGKN 185
Query: 543 MEPV 554
+ V
Sbjct: 186 VREV 189