BLASTX nr result

ID: Coptis24_contig00010711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010711
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532954.1| translation initiation factor eif-2b alpha s...   577   e-162
ref|XP_002331221.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_002271332.2| PREDICTED: translation initiation factor eIF...   571   e-160
emb|CBI35801.3| unnamed protein product [Vitis vinifera]              571   e-160
ref|XP_002304252.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160

>ref|XP_002532954.1| translation initiation factor eif-2b alpha subunit, putative [Ricinus
            communis] gi|223527283|gb|EEF29438.1| translation
            initiation factor eif-2b alpha subunit, putative [Ricinus
            communis]
          Length = 398

 Score =  577 bits (1487), Expect = e-162
 Identities = 300/358 (83%), Positives = 319/358 (89%), Gaps = 3/358 (0%)
 Frame = -2

Query: 1330 IQKPNP--NSNISAYYQTRAAHHGVVTSDWLAQSQAAVGRCVDEGDGKISS-DLGGKCFS 1160
            +Q PNP  NSN+SAYYQTRAAHHGVVTSDWLAQ+QAAVG   ++    ++   + GK FS
Sbjct: 41   LQNPNPHANSNVSAYYQTRAAHHGVVTSDWLAQAQAAVGGQPEDVVAPVNEVRVAGKAFS 100

Query: 1159 VIDEFNRWRKQPDXXXXXXXXXXXASVIRSSEATTMMELEHDLKTASDSLKSWDTTSISL 980
            VIDEFN WRKQPD           A+VI +SEATTMMELE +LK ASDSLK+WDTTSISL
Sbjct: 101  VIDEFNNWRKQPDLAEAVAAIRALAAVIGNSEATTMMELEIELKKASDSLKAWDTTSISL 160

Query: 979  TAGCDLFMRYVTRTSALEYEDFSAGKSRLIERGEKFGEISRKARRTIAMLSQDFIFDGCT 800
            TAGCDLFMRYVTRTSALEYEDF++ KSRLIER EKFGEIS KARR IAMLSQDFIFDGCT
Sbjct: 161  TAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARRIIAMLSQDFIFDGCT 220

Query: 799  ILVHGFSRVVLEVLKTAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKVLIDSAVA 620
            ILVHGFSRVVLEVLKTAAQNKKLFRV CTEGRPDRTGLRLSNELAKLDVPVK+LIDSAVA
Sbjct: 221  ILVHGFSRVVLEVLKTAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVA 280

Query: 619  YIMDEVDMVFVGADGVVESGGIINMMGTYQISLVAHSMSKPVYVAAESYKFARLYPLDQK 440
            Y MDEVDMV VGADGVVESGGIINMMGTYQI+LVAHSM+KPVYVAAESYKFARLYPLDQK
Sbjct: 281  YTMDEVDMVIVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQK 340

Query: 439  DLGPALRPIDFGVPIPAGVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIRLYL 266
            DL PALRPIDFGVPIP+ VEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELI+LYL
Sbjct: 341  DLAPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 398


>ref|XP_002331221.1| predicted protein [Populus trichocarpa] gi|222873342|gb|EEF10473.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  573 bits (1477), Expect = e-161
 Identities = 296/355 (83%), Positives = 314/355 (88%)
 Frame = -2

Query: 1330 IQKPNPNSNISAYYQTRAAHHGVVTSDWLAQSQAAVGRCVDEGDGKISSDLGGKCFSVID 1151
            +Q PNP +NISAYYQTRAAHH VVTSDWLAQ+QAAVG  +D         + GK FSVID
Sbjct: 42   LQNPNPQNNISAYYQTRAAHHAVVTSDWLAQAQAAVGSDLDGAPETGVPTVAGKPFSVID 101

Query: 1150 EFNRWRKQPDXXXXXXXXXXXASVIRSSEATTMMELEHDLKTASDSLKSWDTTSISLTAG 971
            EFN WRKQPD           A+VIR+ +ATTMMELE +LK ASDSLK WDTTSISLTAG
Sbjct: 102  EFNSWRKQPDLAEAVAAIRALAAVIRNCQATTMMELEIELKKASDSLKLWDTTSISLTAG 161

Query: 970  CDLFMRYVTRTSALEYEDFSAGKSRLIERGEKFGEISRKARRTIAMLSQDFIFDGCTILV 791
            CDLFMRYVTRTSALEYEDF++ KSRLIER EKFGEIS KARR IAMLSQDFIFDGCTILV
Sbjct: 162  CDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILV 221

Query: 790  HGFSRVVLEVLKTAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKVLIDSAVAYIM 611
            HGFSRVVLEVLKTAAQ+KKLFRV CTEGRPDRTGLRLSNELAKLDVPVK+LIDSAVAY M
Sbjct: 222  HGFSRVVLEVLKTAAQSKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTM 281

Query: 610  DEVDMVFVGADGVVESGGIINMMGTYQISLVAHSMSKPVYVAAESYKFARLYPLDQKDLG 431
            DEVDMV VGADGVVESGGIINMMGTYQI+LVAHSM+KPVYVAAESYKFARLYPLDQKD+G
Sbjct: 282  DEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMG 341

Query: 430  PALRPIDFGVPIPAGVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIRLYL 266
            PALRPIDFGVPIP+ VEVETSA DYTPPQYLTLLFTDLGVLTPSVVSDELI+LYL
Sbjct: 342  PALRPIDFGVPIPSKVEVETSAWDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 396


>ref|XP_002271332.2| PREDICTED: translation initiation factor eIF-2B subunit alpha-like
            [Vitis vinifera]
          Length = 389

 Score =  571 bits (1471), Expect = e-160
 Identities = 297/351 (84%), Positives = 312/351 (88%)
 Frame = -2

Query: 1318 NPNSNISAYYQTRAAHHGVVTSDWLAQSQAAVGRCVDEGDGKISSDLGGKCFSVIDEFNR 1139
            NPN  ISAYYQTRA HHGVVTSDWLAQ+QAAVGR  D+       D  GK FSVIDEFN 
Sbjct: 40   NPNPKISAYYQTRADHHGVVTSDWLAQAQAAVGRHPDDLPPPKVED-SGKPFSVIDEFNS 98

Query: 1138 WRKQPDXXXXXXXXXXXASVIRSSEATTMMELEHDLKTASDSLKSWDTTSISLTAGCDLF 959
            WRKQPD           ASVIR S+ATTMMELE +LK ASDSLKSWDTTSISLTAGCDLF
Sbjct: 99   WRKQPDLAEAVAAIRALASVIRFSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLF 158

Query: 958  MRYVTRTSALEYEDFSAGKSRLIERGEKFGEISRKARRTIAMLSQDFIFDGCTILVHGFS 779
            MRYVTRTSALEYE+F++ KSRLIER E+FGEIS KARR IAML QDFIFDGCTILVHGFS
Sbjct: 159  MRYVTRTSALEYENFNSAKSRLIERAERFGEISYKARRIIAMLGQDFIFDGCTILVHGFS 218

Query: 778  RVVLEVLKTAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKVLIDSAVAYIMDEVD 599
            RVVLEVLKTAAQNKKLFRV CTEGRPDRTGLRLSNE+AKLDVPVK+LIDSAVAY MDEVD
Sbjct: 219  RVVLEVLKTAAQNKKLFRVFCTEGRPDRTGLRLSNEMAKLDVPVKLLIDSAVAYTMDEVD 278

Query: 598  MVFVGADGVVESGGIINMMGTYQISLVAHSMSKPVYVAAESYKFARLYPLDQKDLGPALR 419
            MVFVGADGVVESGGIINMMGTYQI+LVAHSM+KPVYVAAESYKFARLYPLDQKD+ PALR
Sbjct: 279  MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALR 338

Query: 418  PIDFGVPIPAGVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIRLYL 266
            PIDFGVPIP+ VEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELI+LYL
Sbjct: 339  PIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 389


>emb|CBI35801.3| unnamed protein product [Vitis vinifera]
          Length = 579

 Score =  571 bits (1471), Expect = e-160
 Identities = 297/351 (84%), Positives = 312/351 (88%)
 Frame = -2

Query: 1318 NPNSNISAYYQTRAAHHGVVTSDWLAQSQAAVGRCVDEGDGKISSDLGGKCFSVIDEFNR 1139
            NPN  ISAYYQTRA HHGVVTSDWLAQ+QAAVGR  D+       D  GK FSVIDEFN 
Sbjct: 230  NPNPKISAYYQTRADHHGVVTSDWLAQAQAAVGRHPDDLPPPKVED-SGKPFSVIDEFNS 288

Query: 1138 WRKQPDXXXXXXXXXXXASVIRSSEATTMMELEHDLKTASDSLKSWDTTSISLTAGCDLF 959
            WRKQPD           ASVIR S+ATTMMELE +LK ASDSLKSWDTTSISLTAGCDLF
Sbjct: 289  WRKQPDLAEAVAAIRALASVIRFSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLF 348

Query: 958  MRYVTRTSALEYEDFSAGKSRLIERGEKFGEISRKARRTIAMLSQDFIFDGCTILVHGFS 779
            MRYVTRTSALEYE+F++ KSRLIER E+FGEIS KARR IAML QDFIFDGCTILVHGFS
Sbjct: 349  MRYVTRTSALEYENFNSAKSRLIERAERFGEISYKARRIIAMLGQDFIFDGCTILVHGFS 408

Query: 778  RVVLEVLKTAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKVLIDSAVAYIMDEVD 599
            RVVLEVLKTAAQNKKLFRV CTEGRPDRTGLRLSNE+AKLDVPVK+LIDSAVAY MDEVD
Sbjct: 409  RVVLEVLKTAAQNKKLFRVFCTEGRPDRTGLRLSNEMAKLDVPVKLLIDSAVAYTMDEVD 468

Query: 598  MVFVGADGVVESGGIINMMGTYQISLVAHSMSKPVYVAAESYKFARLYPLDQKDLGPALR 419
            MVFVGADGVVESGGIINMMGTYQI+LVAHSM+KPVYVAAESYKFARLYPLDQKD+ PALR
Sbjct: 469  MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALR 528

Query: 418  PIDFGVPIPAGVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIRLYL 266
            PIDFGVPIP+ VEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELI+LYL
Sbjct: 529  PIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 579


>ref|XP_002304252.1| predicted protein [Populus trichocarpa] gi|222841684|gb|EEE79231.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  571 bits (1471), Expect = e-160
 Identities = 291/355 (81%), Positives = 316/355 (89%)
 Frame = -2

Query: 1330 IQKPNPNSNISAYYQTRAAHHGVVTSDWLAQSQAAVGRCVDEGDGKISSDLGGKCFSVID 1151
            +Q PNP +NISAYYQTRAAH+ VVTSDWLAQ+QAA+G  +D+      + + GK FSVID
Sbjct: 42   LQNPNPQNNISAYYQTRAAHNAVVTSDWLAQAQAAIGHDLDDATETNVATVAGKPFSVID 101

Query: 1150 EFNRWRKQPDXXXXXXXXXXXASVIRSSEATTMMELEHDLKTASDSLKSWDTTSISLTAG 971
            EFN WRKQP+           A+VIR+ +ATTMMELE +LK ASDSLKSWDTTSISLTAG
Sbjct: 102  EFNSWRKQPELAEAVAAIRALAAVIRNCQATTMMELEIELKKASDSLKSWDTTSISLTAG 161

Query: 970  CDLFMRYVTRTSALEYEDFSAGKSRLIERGEKFGEISRKARRTIAMLSQDFIFDGCTILV 791
            CDLFMRYVTRTSALEYEDF++ KSRLIER EKFGEIS KARR IAMLSQDFIFDGCTILV
Sbjct: 162  CDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARRIIAMLSQDFIFDGCTILV 221

Query: 790  HGFSRVVLEVLKTAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKVLIDSAVAYIM 611
            HGFSRVV EVLKTAAQ+KKLFRV CTEGRPDRTGLRLSNELAKLDVPVK+LIDSAVAY M
Sbjct: 222  HGFSRVVFEVLKTAAQSKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTM 281

Query: 610  DEVDMVFVGADGVVESGGIINMMGTYQISLVAHSMSKPVYVAAESYKFARLYPLDQKDLG 431
            DE+DMVFVGADGVVESGGIINMMGT+QI+LVAHSM+KPVYVAAESYKFARLYPLDQKD+ 
Sbjct: 282  DEIDMVFVGADGVVESGGIINMMGTFQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMV 341

Query: 430  PALRPIDFGVPIPAGVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIRLYL 266
            PAL PIDFGVPIP+ VEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELI+LYL
Sbjct: 342  PALHPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 396


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