BLASTX nr result

ID: Coptis24_contig00010704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010704
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303036.1| predicted protein [Populus trichocarpa] gi|2...   124   9e-27
ref|NP_001240156.1| uncharacterized protein LOC100805729 [Glycin...   122   5e-26
ref|XP_003632369.1| PREDICTED: uncharacterized protein LOC100854...   117   2e-24
ref|XP_002521099.1| conserved hypothetical protein [Ricinus comm...   116   3e-24
gb|ACU20742.1| unknown [Glycine max]                                  115   4e-24

>ref|XP_002303036.1| predicted protein [Populus trichocarpa] gi|222844762|gb|EEE82309.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  124 bits (311), Expect = 9e-27
 Identities = 59/99 (59%), Positives = 77/99 (77%)
 Frame = -2

Query: 300 GITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHATLVLS 121
           G+T+QL + +KSFT++TFKN+ LQD    S++      +S N Q+DLSEWQE HATLVLS
Sbjct: 42  GVTQQLIDHVKSFTIDTFKNFPLQDEATPSSTK-----TSSNVQRDLSEWQERHATLVLS 96

Query: 120 KVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEI 4
           K KE+S LR++LCPRHLKER+FW IYF LVK++V  YE+
Sbjct: 97  KAKELSHLRFMLCPRHLKERQFWMIYFMLVKSHVAEYEL 135


>ref|NP_001240156.1| uncharacterized protein LOC100805729 [Glycine max]
           gi|255645390|gb|ACU23191.1| unknown [Glycine max]
          Length = 178

 Score =  122 bits (305), Expect = 5e-26
 Identities = 60/100 (60%), Positives = 77/100 (77%)
 Frame = -2

Query: 300 GITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHATLVLS 121
           GITE+L N IK+FTL+TFKN+ LQD  + S    D  +SS   + +LS+WQE HA LVLS
Sbjct: 38  GITEELINHIKTFTLDTFKNFPLQDEVEGSYGE-DTQSSSTKVRNELSQWQEKHAILVLS 96

Query: 120 KVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYEIR 1
           +VKE+SQLRYVLCPRHLKE +FW+IYF L +++V  YE+R
Sbjct: 97  RVKEMSQLRYVLCPRHLKESQFWKIYFKLARSHVLEYELR 136


>ref|XP_003632369.1| PREDICTED: uncharacterized protein LOC100854111 [Vitis vinifera]
           gi|297744340|emb|CBI37310.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/98 (59%), Positives = 72/98 (73%)
 Frame = -2

Query: 300 GITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHATLVLS 121
           G+T+QL + +KSF+  TFKN+ LQD    +  +     S+ N  +DLSEWQE HA LVLS
Sbjct: 28  GVTDQLIDTVKSFSFHTFKNFPLQDDHGINGGDNSQATST-NIGKDLSEWQERHAMLVLS 86

Query: 120 KVKEISQLRYVLCPRHLKEREFWRIYFALVKNYVTPYE 7
           KVKE+SQLRY LCP HLKE++FWRIYF LVK+YV  YE
Sbjct: 87  KVKELSQLRYRLCPGHLKEQQFWRIYFMLVKSYVAEYE 124


>ref|XP_002521099.1| conserved hypothetical protein [Ricinus communis]
           gi|223539668|gb|EEF41250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  116 bits (290), Expect = 3e-24
 Identities = 61/101 (60%), Positives = 76/101 (75%), Gaps = 9/101 (8%)
 Frame = -2

Query: 300 GITEQLQNFIKSFTLETFKNYSLQDGQKTS---TSNGDIV------NSSDNNQQDLSEWQ 148
           GIT QL + +KSFT++TFKN+ LQD +  S   T + +I+      ++S N Q+DLSEWQ
Sbjct: 36  GITHQLIDRVKSFTIDTFKNFPLQDEEAASSRATLSDEILAATSTTSTSANVQKDLSEWQ 95

Query: 147 EGHATLVLSKVKEISQLRYVLCPRHLKEREFWRIYFALVKN 25
           E HA LVLSKVKE+SQLR+ LCP HLKEREFWRIYF LV+N
Sbjct: 96  ERHAILVLSKVKELSQLRFKLCPGHLKEREFWRIYFTLVRN 136


>gb|ACU20742.1| unknown [Glycine max]
          Length = 132

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/94 (60%), Positives = 73/94 (77%)
 Frame = -2

Query: 300 GITEQLQNFIKSFTLETFKNYSLQDGQKTSTSNGDIVNSSDNNQQDLSEWQEGHATLVLS 121
           GITE+L N IK+FTL+TFKN+ LQD  + S    D  +SS   + +LS+WQE HA LVLS
Sbjct: 38  GITEELINHIKTFTLDTFKNFPLQDEVEGSYGE-DTQSSSTKVRNELSQWQEKHAILVLS 96

Query: 120 KVKEISQLRYVLCPRHLKEREFWRIYFALVKNYV 19
           +VKE+SQLRYVLCPRHLKE +FW+IYF L +++V
Sbjct: 97  RVKEMSQLRYVLCPRHLKESQFWKIYFKLARSHV 130


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