BLASTX nr result
ID: Coptis24_contig00010697
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010697
(941 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich... 101 1e-49
ref|XP_002268589.2| PREDICTED: putative disease resistance prote... 91 5e-48
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich... 102 9e-48
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca... 106 1e-47
ref|XP_002267795.1| PREDICTED: putative disease resistance prote... 85 5e-46
>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 987
Score = 101 bits (251), Expect(3) = 1e-49
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = -1
Query: 551 QLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLHQLLCNSVK 372
QL YN + I T FE +IWVCVS PFD VA+ IIE +G P +V +PL + + S++
Sbjct: 241 QLAYNADEIKTYFEKRIWVCVSHPFDENTVAKAIIEDLSGAAPNLVELEPLCKRISESIE 300
Query: 371 GKRFLLVLDDVWTEDSSCWEPLKLSLNGGERGS 273
GK+FLLVLDDVW ++ WEPLK SL G GS
Sbjct: 301 GKKFLLVLDDVWEDNPRKWEPLKESLKCGAPGS 333
Score = 84.3 bits (207), Expect(3) = 1e-49
Identities = 43/96 (44%), Positives = 66/96 (68%)
Frame = -3
Query: 939 RHDIAHKIGGIREKLDEIACSRDQLGLIQSHSHHEEPRQLTSSVVDVSVIFGRDHDKRKI 760
RHDIAHKI + +KL++IA + G + +EP + T+S VDVS + GR+ +K+ +
Sbjct: 149 RHDIAHKIIEVGQKLEDIAKRKAMFGFELHKAIEKEPDRQTTSFVDVSRVHGREDEKKNV 208
Query: 759 LGKLVCETSQQETRVRIPILSIVGTAGFGKTTLAQL 652
+ KL+C++SQ+ +V+ ++SIVG G GKTTLAQL
Sbjct: 209 ISKLLCDSSQEGRKVQ--VISIVGMGGLGKTTLAQL 242
Score = 59.3 bits (142), Expect(3) = 1e-49
Identities = 25/60 (41%), Positives = 41/60 (68%)
Frame = -2
Query: 181 VTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQIAFLERSEEDCERLKGIGQKLAKKCK 2
VTTR + VAKM+ S + L +L++++CW +F Q+AF RS++ CE IG+++ +CK
Sbjct: 337 VTTRKDTVAKMMESDYSLLLGKLTDEECWSVFSQVAFYGRSQDACEMFTEIGRQIVYRCK 396
>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
vinifera]
Length = 922
Score = 91.3 bits (225), Expect(3) = 5e-48
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = -1
Query: 551 QLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLHQLLCNSVK 372
QL YN + F+ +IWVCVS+PFD R+ REI+E GE P + + L Q + +
Sbjct: 214 QLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGESPNLHSLEALQQKIQTYIA 273
Query: 371 GKRFLLVLDDVWTEDSSCWEPLKLSLNGGERGS 273
GK+FL+VLDDVWTE+ W LK +LN G GS
Sbjct: 274 GKKFLIVLDDVWTENHQLWGQLKSTLNCGGVGS 306
Score = 81.3 bits (199), Expect(3) = 5e-48
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -3
Query: 939 RHDIAHKIGGIREKLDEIACSRDQLGLIQSHSHHEEPRQ-LTSSVVDVSVIFGRDHDKRK 763
R DIA K+ I+++LD IA R Q I S S EEP++ +T+S +D+ ++GRD DK
Sbjct: 122 RRDIALKVKSIKQQLDVIASQRSQFNFISSLS--EEPQRFITTSQLDIPEVYGRDMDKNT 179
Query: 762 ILGKLVCETSQQETRVRIPILSIVGTAGFGKTTLAQL 652
ILG L+ ET QET+ I+SIVGT G GKTTLAQL
Sbjct: 180 ILGHLLGETC-QETKSGPYIISIVGTGGMGKTTLAQL 215
Score = 66.6 bits (161), Expect(3) = 5e-48
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -2
Query: 178 TTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQIAFLERSEEDCERLKGIGQKLAKKCK 2
TTR E V KM+G+T+ H LEELS + +F QIAF E+S E E L IG+ +A KCK
Sbjct: 311 TTRKESVVKMVGTTYTHSLEELSREQARALFHQIAFFEKSREKVEELNEIGENIADKCK 369
>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 945
Score = 102 bits (255), Expect(3) = 9e-48
Identities = 51/93 (54%), Positives = 61/93 (65%)
Frame = -1
Query: 551 QLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLHQLLCNSVK 372
QL +N+ + FE KIWVCVSEPFD R+A+ I+EQ G P +V Q L Q + S+
Sbjct: 215 QLAFNDSEVTAHFEKKIWVCVSEPFDEIRIAKAILEQLEGRPTNLVELQSLLQGVSESIT 274
Query: 371 GKRFLLVLDDVWTEDSSCWEPLKLSLNGGERGS 273
GKR LLVLDDVWTE+ WE LK SL G RGS
Sbjct: 275 GKRLLLVLDDVWTENHGQWEQLKPSLTGCARGS 307
Score = 71.2 bits (173), Expect(3) = 9e-48
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = -3
Query: 939 RHDIAHKIGGIREKLDEIACSRDQLGLIQSHSHHEEPRQLTSSVVDVSVIFGRDHDKRKI 760
R DIA KI + EK+D+IA R + G E R T+S VD S + GRD +KR +
Sbjct: 123 RRDIALKIKEVSEKVDDIAKERAKYGFDLYKGTDELQRLTTTSFVDESSVIGRDGEKRNV 182
Query: 759 LGKLVCETSQQETRVRIPILSIVGTAGFGKTTLAQL 652
+ KL+ E+S + V ++S+VG G GKTTLAQL
Sbjct: 183 VSKLLAESSHEARDV--DVISLVGLGGIGKTTLAQL 216
Score = 64.3 bits (155), Expect(3) = 9e-48
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = -2
Query: 181 VTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQIAFLERSEEDCERLKGIGQKLAKKCK 2
VTTR + VA M+G+ R +E+LS++ C IF +AF ERSE++ ERL IG K+A KCK
Sbjct: 311 VTTRKDAVATMMGTDHRINIEKLSDEICRSIFNHVAFQERSEDERERLTDIGDKIANKCK 370
>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 799
Score = 106 bits (264), Expect(3) = 1e-47
Identities = 51/93 (54%), Positives = 63/93 (67%)
Frame = -1
Query: 551 QLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLHQLLCNSVK 372
QL +N+ + FE KIWVCVS+PFD ++A+ I+EQ G P +V Q L Q + S+K
Sbjct: 124 QLAFNDSEVTAHFEKKIWVCVSDPFDEVKIAKAILEQLEGSAPNLVELQSLLQRVSESIK 183
Query: 371 GKRFLLVLDDVWTEDSSCWEPLKLSLNGGERGS 273
GKRFLLVLDDVWTE+ WE LK SL G RGS
Sbjct: 184 GKRFLLVLDDVWTENHGQWEKLKPSLTGCARGS 216
Score = 69.3 bits (168), Expect(3) = 1e-47
Identities = 41/96 (42%), Positives = 57/96 (59%)
Frame = -3
Query: 939 RHDIAHKIGGIREKLDEIACSRDQLGLIQSHSHHEEPRQLTSSVVDVSVIFGRDHDKRKI 760
R DIA KI + EK+++IA R G E R T+S VD S + GRD +K+ +
Sbjct: 32 RRDIALKIKEVSEKVNDIAKERAMFGFELYRVTDELQRLTTTSFVDESSVIGRDGEKKNV 91
Query: 759 LGKLVCETSQQETRVRIPILSIVGTAGFGKTTLAQL 652
+ KL+ E+SQ+ V ++S+VG G GKTTLAQL
Sbjct: 92 VSKLLAESSQKARDV--DVISLVGLGGIGKTTLAQL 125
Score = 62.4 bits (150), Expect(3) = 1e-47
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 VTTRNEEVAKMIGST-FRHRLEELSEDDCWHIFRQIAFLERSEEDCERLKGIGQKLAKKC 5
VTTR + VA M+GST R ++ELS++ C IF +AF ERS+++ ERL IG+K+A KC
Sbjct: 220 VTTRKDAVATMMGSTGHRINIKELSDEICRSIFNHVAFQERSKDERERLTDIGEKIASKC 279
Query: 4 K 2
K
Sbjct: 280 K 280
>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
vinifera]
Length = 928
Score = 84.7 bits (208), Expect(3) = 5e-46
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = -1
Query: 551 QLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLHQLLCNSVK 372
QL YN E + + F ++WVCVS+PFD R++R I+E + + + Q +C +
Sbjct: 213 QLAYNHEKVKSYFHERMWVCVSDPFDPMRISRAILEALQKKSSGFHDLEAVQQKICTLIA 272
Query: 371 GKRFLLVLDDVWTEDSSCWEPLKLSLNGGERGS 273
++FLLVLDDVWTE+ WE ++ SL GG GS
Sbjct: 273 DEKFLLVLDDVWTENYELWEQVESSLKGGAPGS 305
Score = 75.1 bits (183), Expect(3) = 5e-46
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = -3
Query: 939 RHDIAHKIGGIREKLDEIACSRDQLGLIQSHSHHEEPRQLTSSVVDVSVIFGRDHDKRKI 760
RHDIA +I I+++L+ IA R+Q + S + R++TSSV+DVS GRD D I
Sbjct: 121 RHDIALQIKDIKKQLNAIANERNQFNFVSSSIIQQPHRRITSSVIDVSQFCGRDADINII 180
Query: 759 LGKLVCETSQQETRVRIPILSIVGTAGFGKTTLAQL 652
+GKL+ + Q+ + + I+SIVG G GKTTLAQL
Sbjct: 181 IGKLLGGSCQESS--SLYIVSIVGMGGIGKTTLAQL 214
Score = 72.8 bits (177), Expect(3) = 5e-46
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = -2
Query: 181 VTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQIAFLERSEEDCERLKGIGQKLAKKCK 2
VTTRNE V+ M+G+T++H L ELS++ CW +F IAF RS E E L+ IG+K+A KC+
Sbjct: 309 VTTRNENVSTMMGTTYKHPLGELSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKCR 368