BLASTX nr result

ID: Coptis24_contig00010690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010690
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like is...   236   1e-60
ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...   236   1e-60
ref|XP_002526576.1| Cell division control protein, putative [Ric...   236   2e-60
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
ref|XP_002263924.2| PREDICTED: ALA-interacting subunit 1, partia...   215   3e-54

>ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis
           sativus] gi|449501692|ref|XP_004161439.1| PREDICTED:
           ALA-interacting subunit 5-like isoform 2 [Cucumis
           sativus]
          Length = 337

 Score =  236 bits (603), Expect = 1e-60
 Identities = 121/180 (67%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
 Frame = +1

Query: 4   TTKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXXLASLFASQQVVEIV 183
           T  + SKKPKYSRFTQQELPACKPILTPGW                +ASLFAS+QVVEIV
Sbjct: 23  TPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIV 82

Query: 184 ERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYV 360
           ++YD DC+ S F      FIK S TNKTC +KL V K MK PV+VYYQ+D+FYQNHRRYV
Sbjct: 83  DQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYV 142

Query: 361 KSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSK 537
           KSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDTYGFS+KNK L+VSK
Sbjct: 143 KSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSK 202


>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score =  236 bits (603), Expect = 1e-60
 Identities = 121/180 (67%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
 Frame = +1

Query: 4   TTKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXXLASLFASQQVVEIV 183
           T  + SKKPKYSRFTQQELPACKPILTPGW                +ASLFAS+QVVEIV
Sbjct: 23  TPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIV 82

Query: 184 ERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYV 360
           ++YD DC+ S F      FIK S TNKTC +KL V K MK PV+VYYQ+D+FYQNHRRYV
Sbjct: 83  DQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYV 142

Query: 361 KSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSK 537
           KSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDTYGFS+KNK L+VSK
Sbjct: 143 KSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSK 202


>ref|XP_002526576.1| Cell division control protein, putative [Ricinus communis]
           gi|223534070|gb|EEF35788.1| Cell division control
           protein, putative [Ricinus communis]
          Length = 386

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/178 (64%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
 Frame = +1

Query: 10  KRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXXLASLFASQQVVEIVER 189
           KR+S+KPKYSRFTQQELPACKPILTPGW                L +LFAS++VVEIV+R
Sbjct: 19  KRNSRKPKYSRFTQQELPACKPILTPGWVITAFVAVGIIFIPIGLTTLFASERVVEIVDR 78

Query: 190 YDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKS 366
           YD DCI  ++ ++  ++I+ S+TNKTC + L + K MKSPVF+YY++D+FYQNHRRYVKS
Sbjct: 79  YDKDCIPHNYQNESLEYIQSSNTNKTCTRSLTIPKQMKSPVFIYYELDNFYQNHRRYVKS 138

Query: 367 RSDKQLRSKGYEDLTATCEPEAKT-NNGPIVPCGLIAWSLFNDTYGFSVKNKVLEVSK 537
           RSDKQLRSK  E  T +C+PEA T +N PIVPCGLIAWSLFNDTYGFS+KNK L VSK
Sbjct: 139 RSDKQLRSKAGETNTDSCKPEAVTPSNAPIVPCGLIAWSLFNDTYGFSLKNKALYVSK 196


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  232 bits (591), Expect = 3e-59
 Identities = 114/177 (64%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
 Frame = +1

Query: 13  RSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXXLASLFASQQVVEIVERY 192
           + +KKP YSRFTQQELPACKPILTPGW                LASL+AS+ VVEIVERY
Sbjct: 23  KKNKKPNYSRFTQQELPACKPILTPGWVITSFIVVGVVFIPIGLASLYASEHVVEIVERY 82

Query: 193 DSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSR 369
           D DCI   + +    +I+ S+ NKTC   + V KHMKSPVF+YY++D+FYQNHRRYVKSR
Sbjct: 83  DKDCIPPDYRNNSLHYIQTSEINKTCTMTINVPKHMKSPVFIYYELDNFYQNHRRYVKSR 142

Query: 370 SDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSK 537
           SDKQLRSK  E +T TC+PEA T+NG PIVPCGL+AWSLFNDTY FSVK +VL+VSK
Sbjct: 143 SDKQLRSKASEGVTETCKPEAVTSNGQPIVPCGLVAWSLFNDTYRFSVKKEVLDVSK 199


>ref|XP_002263924.2| PREDICTED: ALA-interacting subunit 1, partial [Vitis vinifera]
          Length = 304

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/169 (63%), Positives = 130/169 (76%), Gaps = 2/169 (1%)
 Frame = +1

Query: 37  SRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXXLASLFASQQVVEIVERYDSDCISSS 216
           SRFTQQELPACKPILTPGW                LASLFAS++VVEIV RYD+DC+ +S
Sbjct: 1   SRFTQQELPACKPILTPGWVISSFIFVGIIFIPIGLASLFASERVVEIVHRYDTDCVPAS 60

Query: 217 F-SDKEDFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSK 393
           + +D   +I+ ++TNKTC +  LV K MKSPV++YYQ+D+FYQNHRRYVKSRSDKQLRS+
Sbjct: 61  YRNDMLAYIQSNETNKTCTRTFLVPKQMKSPVYIYYQLDNFYQNHRRYVKSRSDKQLRSR 120

Query: 394 GYEDLTATCEPEAKTNN-GPIVPCGLIAWSLFNDTYGFSVKNKVLEVSK 537
             E+ T++C+PE  T+N   IVPCGLIAWSLFNDTYGFSV N +L VSK
Sbjct: 121 ASENDTSSCDPEDVTSNKSAIVPCGLIAWSLFNDTYGFSVNNTLLGVSK 169


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