BLASTX nr result
ID: Coptis24_contig00010681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010681 (1082 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521322.1| protein with unknown function [Ricinus commu... 239 1e-60 ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1... 234 2e-59 ref|XP_002273931.1| PREDICTED: transcription initiation factor T... 229 1e-57 ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycin... 228 2e-57 ref|XP_004141702.1| PREDICTED: transcription initiation factor T... 228 3e-57 >ref|XP_002521322.1| protein with unknown function [Ricinus communis] gi|223539400|gb|EEF40990.1| protein with unknown function [Ricinus communis] Length = 175 Score = 239 bits (609), Expect = 1e-60 Identities = 116/129 (89%), Positives = 126/129 (97%), Gaps = 1/129 (0%) Frame = +1 Query: 85 EGEENCPRDAKIVKSLLKSMGVEEYEPRVIHQFLELWYRYVVDVLSDSQVYSEHAGKNAI 264 EG+EN PRDAKIVKSLLKSMGVE+YEPRVIHQFLELWYRYVVDVL+D+QVYSEHAGK+AI Sbjct: 3 EGDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAI 62 Query: 265 DCDDVKLAIQTKVNSSFSQPPPREILLELARNRNKVPLPKSIA-PGIPLPPEEDTLISPN 441 DCDDVKLAIQ+KVN SFSQPPPRE+LLELARNRNK+PLPKSIA PG+PLPPE+DTLISPN Sbjct: 63 DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPN 122 Query: 442 YQLAIPKKQ 468 YQLAIPKKQ Sbjct: 123 YQLAIPKKQ 131 >ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1| unknown [Populus trichocarpa] gi|222846845|gb|EEE84392.1| predicted protein [Populus trichocarpa] Length = 175 Score = 234 bits (598), Expect = 2e-59 Identities = 114/129 (88%), Positives = 124/129 (96%), Gaps = 1/129 (0%) Frame = +1 Query: 85 EGEENCPRDAKIVKSLLKSMGVEEYEPRVIHQFLELWYRYVVDVLSDSQVYSEHAGKNAI 264 EGEE+ PRDAKIVKSLLKSMGVE+YEPRV+HQFLELWYRYVVDVL+D+QVYSEHA K AI Sbjct: 3 EGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAI 62 Query: 265 DCDDVKLAIQTKVNSSFSQPPPREILLELARNRNKVPLPKSIA-PGIPLPPEEDTLISPN 441 DCDDVKLAIQ+KVN SFSQPPPRE+LLELARNRNK+PLPKSIA PGIPLPPE+DTLISPN Sbjct: 63 DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPN 122 Query: 442 YQLAIPKKQ 468 YQLAIPKK+ Sbjct: 123 YQLAIPKKR 131 >ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis vinifera] gi|297742999|emb|CBI35866.3| unnamed protein product [Vitis vinifera] Length = 177 Score = 229 bits (583), Expect = 1e-57 Identities = 112/129 (86%), Positives = 123/129 (95%), Gaps = 1/129 (0%) Frame = +1 Query: 85 EGEENCPRDAKIVKSLLKSMGVEEYEPRVIHQFLELWYRYVVDVLSDSQVYSEHAGKNAI 264 EG+E+ PRDAKIVKSLLKSMGV++YEPRVIHQFLELWYRYVVDVL+D+QVYSEHA K AI Sbjct: 3 EGDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAI 62 Query: 265 DCDDVKLAIQTKVNSSFSQPPPREILLELARNRNKVPLPKSIA-PGIPLPPEEDTLISPN 441 DCDDVKLAIQ+KVN SFSQPP RE+LLELARNRNK+PLPKSIA PGIPLPPE+DTLISPN Sbjct: 63 DCDDVKLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPN 122 Query: 442 YQLAIPKKQ 468 YQLAIPKK+ Sbjct: 123 YQLAIPKKR 131 >ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycine max] gi|255632872|gb|ACU16789.1| unknown [Glycine max] Length = 174 Score = 228 bits (582), Expect = 2e-57 Identities = 112/135 (82%), Positives = 127/135 (94%), Gaps = 1/135 (0%) Frame = +1 Query: 70 MAEREEGEENCPRDAKIVKSLLKSMGVEEYEPRVIHQFLELWYRYVVDVLSDSQVYSEHA 249 MA++EE E PRDAKIVKSLLKSMGVE+YEPRVIH+FLELWYRYVVDVL+D+QVYSEHA Sbjct: 1 MADKEE-ESAMPRDAKIVKSLLKSMGVEDYEPRVIHKFLELWYRYVVDVLTDAQVYSEHA 59 Query: 250 GKNAIDCDDVKLAIQTKVNSSFSQPPPREILLELARNRNKVPLPKSIA-PGIPLPPEEDT 426 GK+AIDCDDVKLAIQ+KVN SFSQPPPRE+LLELA+NRNK+PLPK+IA PGIPLPP++DT Sbjct: 60 GKSAIDCDDVKLAIQSKVNFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGIPLPPDQDT 119 Query: 427 LISPNYQLAIPKKQP 471 LISPNYQ AIP K+P Sbjct: 120 LISPNYQFAIPNKRP 134 >ref|XP_004141702.1| PREDICTED: transcription initiation factor TFIID subunit 9-like [Cucumis sativus] gi|449480520|ref|XP_004155919.1| PREDICTED: transcription initiation factor TFIID subunit 9-like [Cucumis sativus] Length = 179 Score = 228 bits (580), Expect = 3e-57 Identities = 110/129 (85%), Positives = 122/129 (94%), Gaps = 1/129 (0%) Frame = +1 Query: 85 EGEENCPRDAKIVKSLLKSMGVEEYEPRVIHQFLELWYRYVVDVLSDSQVYSEHAGKNAI 264 EG+E PRDAKIVK+LLKSMGVE+YEPRVIHQFLELWYRYVVDVL+D+QVYSEHAGK AI Sbjct: 3 EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 62 Query: 265 DCDDVKLAIQTKVNSSFSQPPPREILLELARNRNKVPLPKSI-APGIPLPPEEDTLISPN 441 DCDDVKLAIQ+KVN SFSQPPPRE+LLELARNRNK+PLP+SI PGI LPP++DTL+SPN Sbjct: 63 DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPN 122 Query: 442 YQLAIPKKQ 468 YQLAIPKKQ Sbjct: 123 YQLAIPKKQ 131