BLASTX nr result
ID: Coptis24_contig00010678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010678 (606 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4... 345 4e-93 emb|CBI36841.3| unnamed protein product [Vitis vinifera] 342 2e-92 ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4... 342 2e-92 ref|XP_002523063.1| multidrug resistance-associated protein 2, 6... 342 4e-92 ref|XP_002321011.1| multidrug resistance protein ABC transporter... 341 7e-92 >ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max] Length = 1501 Score = 345 bits (885), Expect = 4e-93 Identities = 163/202 (80%), Positives = 184/202 (91%) Frame = -1 Query: 606 LSLSYGLSLNGVLFYAVYMSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHG 427 LSLSYGLSLN V+F+A+YMSCF+EN+++SVERIKQF NIPSEA W+I+ +P NWP G Sbjct: 1198 LSLSYGLSLNAVMFWAIYMSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEG 1257 Query: 426 DVDIKDLQVRYRPNTPLILKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKI 247 VDIKDLQVRYRPNTPL+LKGITLSI GGEKIGVVGRTGSGKSTLIQ FRL+EP+GGKI Sbjct: 1258 HVDIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKI 1317 Query: 246 VIDGIDISTLGLHDLRSRFGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDV 67 +IDGIDIS LGLHDLRSRFGIIPQEPVLF+GT+RSNIDPTG Y+DEEIW+SLERCQLKD Sbjct: 1318 IIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDA 1377 Query: 66 VMAKPDKLDASVVDSGDNWSVG 1 V +KP+KLD SVVD+GDNWSVG Sbjct: 1378 VASKPEKLDTSVVDNGDNWSVG 1399 >emb|CBI36841.3| unnamed protein product [Vitis vinifera] Length = 1079 Score = 342 bits (878), Expect = 2e-92 Identities = 160/202 (79%), Positives = 184/202 (91%) Frame = -1 Query: 606 LSLSYGLSLNGVLFYAVYMSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHG 427 LSLSYGLSLN VLF+A+YMSCFVEN+++SVERIKQF NIPSEA W I+ +P PNWPTHG Sbjct: 776 LSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHG 835 Query: 426 DVDIKDLQVRYRPNTPLILKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKI 247 +V++KDLQVRYRPN+PL+LKGITL+I+G EKIGVVGRTGSGKSTL+Q FRL+EPSGGKI Sbjct: 836 NVELKDLQVRYRPNSPLVLKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKI 895 Query: 246 VIDGIDISTLGLHDLRSRFGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDV 67 +IDGIDI LGLHDLRSRFGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+V Sbjct: 896 IIDGIDIGMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEV 955 Query: 66 VMAKPDKLDASVVDSGDNWSVG 1 V KPDKLD+ VVD+GDNWSVG Sbjct: 956 VAGKPDKLDSLVVDNGDNWSVG 977 >ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera] Length = 1509 Score = 342 bits (878), Expect = 2e-92 Identities = 160/202 (79%), Positives = 184/202 (91%) Frame = -1 Query: 606 LSLSYGLSLNGVLFYAVYMSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHG 427 LSLSYGLSLN VLF+A+YMSCFVEN+++SVERIKQF NIPSEA W I+ +P PNWPTHG Sbjct: 1206 LSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHG 1265 Query: 426 DVDIKDLQVRYRPNTPLILKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKI 247 +V++KDLQVRYRPN+PL+LKGITL+I+G EKIGVVGRTGSGKSTL+Q FRL+EPSGGKI Sbjct: 1266 NVELKDLQVRYRPNSPLVLKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKI 1325 Query: 246 VIDGIDISTLGLHDLRSRFGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDV 67 +IDGIDI LGLHDLRSRFGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+V Sbjct: 1326 IIDGIDIGMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEV 1385 Query: 66 VMAKPDKLDASVVDSGDNWSVG 1 V KPDKLD+ VVD+GDNWSVG Sbjct: 1386 VAGKPDKLDSLVVDNGDNWSVG 1407 >ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] gi|223537625|gb|EEF39248.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] Length = 1506 Score = 342 bits (876), Expect = 4e-92 Identities = 163/202 (80%), Positives = 183/202 (90%) Frame = -1 Query: 606 LSLSYGLSLNGVLFYAVYMSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHG 427 LSLSYGLSLNGVLF+A+YMSCFVENR++SVERIKQF NIPSEA W I+ IP P+WP G Sbjct: 1203 LSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTNIPSEAAWKIKDRIPPPSWPAQG 1262 Query: 426 DVDIKDLQVRYRPNTPLILKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKI 247 +VD+KDLQV+YRPNTPL+LKGITLSI GGEKIGVVGRTGSGKSTLIQ FRL+EP+GGKI Sbjct: 1263 NVDLKDLQVKYRPNTPLVLKGITLSIYGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKI 1322 Query: 246 VIDGIDISTLGLHDLRSRFGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDV 67 +IDGIDI LGL DLRSRFGIIPQEPVLF+GT+RSNIDP G Y+DE+IW+SLERCQLKDV Sbjct: 1323 IIDGIDICMLGLQDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEQIWKSLERCQLKDV 1382 Query: 66 VMAKPDKLDASVVDSGDNWSVG 1 V AKP+KLDA V D+GDNWSVG Sbjct: 1383 VAAKPEKLDALVADNGDNWSVG 1404 >ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222861784|gb|EEE99326.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1507 Score = 341 bits (874), Expect = 7e-92 Identities = 161/202 (79%), Positives = 181/202 (89%) Frame = -1 Query: 606 LSLSYGLSLNGVLFYAVYMSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHG 427 LSLSYGLSLN VLF+ +Y+SCFVENR++SVERIKQF NI SEA W IE +P PNWP G Sbjct: 1204 LSLSYGLSLNSVLFWCIYLSCFVENRMVSVERIKQFTNISSEAAWKIEDRVPPPNWPAIG 1263 Query: 426 DVDIKDLQVRYRPNTPLILKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKI 247 +VD+KDLQVRYRPNTPL+LKGITLSIQGGEKIGVVGRTGSGKST+IQ FRL+EP+GGKI Sbjct: 1264 NVDLKDLQVRYRPNTPLVLKGITLSIQGGEKIGVVGRTGSGKSTMIQVFFRLVEPTGGKI 1323 Query: 246 VIDGIDISTLGLHDLRSRFGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDV 67 +IDGIDI LGLHDLRSRFGIIPQEPVLF+GT+RSN+DP G Y+DEEIW SLERCQLKDV Sbjct: 1324 IIDGIDICMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYTDEEIWESLERCQLKDV 1383 Query: 66 VMAKPDKLDASVVDSGDNWSVG 1 V AKP+KLD+ V D+GDNWSVG Sbjct: 1384 VAAKPEKLDSPVTDNGDNWSVG 1405