BLASTX nr result

ID: Coptis24_contig00010677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010677
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136033.1| PREDICTED: ABC transporter C family member 4...    66   3e-09
ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4...    65   4e-09
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...    65   7e-09
ref|XP_004171957.1| PREDICTED: ABC transporter C family member 4...    64   1e-08
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...    64   1e-08

>ref|XP_004136033.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 1495

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +1

Query: 226  KSLERCQLKDVVSAKPDKLDASVIDSGDNCSVGQRQL 336
            KSLERCQLKD+VSAKPDKLD+SV+ +GDN SVGQRQL
Sbjct: 1361 KSLERCQLKDIVSAKPDKLDSSVVANGDNWSVGQRQL 1397


>ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 1499

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +1

Query: 226  KSLERCQLKDVVSAKPDKLDASVIDSGDNCSVGQRQL 336
            KSLERCQLKDVV+AKPDKLD+SV+ +GDN SVGQRQL
Sbjct: 1366 KSLERCQLKDVVAAKPDKLDSSVVANGDNWSVGQRQL 1402


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355522585|gb|AET03039.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1498

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +1

Query: 226  KSLERCQLKDVVSAKPDKLDASVIDSGDNCSVGQRQL 336
            KSLERCQLK+VV+AKP+KL+ASV+D GDN SVGQRQL
Sbjct: 1366 KSLERCQLKEVVAAKPEKLEASVVDGGDNWSVGQRQL 1402


>ref|XP_004171957.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 254

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 229 SLERCQLKDVVSAKPDKLDASVIDSGDNCSVGQRQL 336
           SLERCQLKD+VSAKPDKLD+SV+ +GDN SVGQRQL
Sbjct: 121 SLERCQLKDIVSAKPDKLDSSVVANGDNWSVGQRQL 156


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +1

Query: 226  KSLERCQLKDVVSAKPDKLDASVIDSGDNCSVGQRQL 336
            KSLERCQLKDVV+AKP+KL+A V+D GDN SVGQRQL
Sbjct: 1369 KSLERCQLKDVVAAKPEKLEAPVVDGGDNWSVGQRQL 1405


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