BLASTX nr result

ID: Coptis24_contig00010672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010672
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|2...   249   6e-64
ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinu...   248   7e-64
emb|CBI20237.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1...   247   2e-63
ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1...   246   5e-63

>ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|222847662|gb|EEE85209.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  249 bits (635), Expect = 6e-64
 Identities = 127/178 (71%), Positives = 145/178 (81%)
 Frame = -2

Query: 535 RSIVTSCRAVVIPRFGGPEVLQIRSNVQIPDLKPHHVLVRARAVSINPLDTRMRAGYGRS 356
           R I TSCRAVV+PRFGGPE+LQ+RS+V++P LKP+ VLVRARAVSINPLDTRMR+GYGRS
Sbjct: 2   RFIATSCRAVVLPRFGGPEMLQLRSDVEVPQLKPNEVLVRARAVSINPLDTRMRSGYGRS 61

Query: 355 IFGPLLPLILGRDXXXXXXXXXXXVRSLNVGQDVFGALHPTAARGTYADYAILNEEQLTP 176
           IF PLLPLILGRD           VRS +VG++VFGALHPTA RGTY DYA+L+E++L P
Sbjct: 62  IFEPLLPLILGRDISGEVAAVGNSVRSFSVGEEVFGALHPTAVRGTYTDYAVLSEDELAP 121

Query: 175 KPPSVSHVEASAIPFAALTAWRALKSTARIAEGQRXXXXXXXXXXXLSAIQLAAAAGC 2
           KPPS++HVEASAIPFAALTAWRALKSTARI EGQR           L+AIQLAAAA C
Sbjct: 122 KPPSLTHVEASAIPFAALTAWRALKSTARITEGQRILVVGGGGAVGLAAIQLAAAARC 179


>ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinus communis]
           gi|223542457|gb|EEF43998.1| zinc binding dehydrogenase,
           putative [Ricinus communis]
          Length = 365

 Score =  248 bits (634), Expect = 7e-64
 Identities = 130/186 (69%), Positives = 148/186 (79%)
 Frame = -2

Query: 559 KLGLVISKRSIVTSCRAVVIPRFGGPEVLQIRSNVQIPDLKPHHVLVRARAVSINPLDTR 380
           KLG V   R +VTSCRAVV+PRFGGPEVL++RS+V++P +KP+ VLVR RAVS+NPLDTR
Sbjct: 19  KLGSV---RFLVTSCRAVVLPRFGGPEVLELRSDVEVPQIKPNEVLVRTRAVSVNPLDTR 75

Query: 379 MRAGYGRSIFGPLLPLILGRDXXXXXXXXXXXVRSLNVGQDVFGALHPTAARGTYADYAI 200
           MR+GYGRSIF PLLPLILGRD           V+SL+VGQ+VFGALHPTA RGTY DYAI
Sbjct: 76  MRSGYGRSIFEPLLPLILGRDISGEVTAIGTSVQSLSVGQEVFGALHPTAVRGTYTDYAI 135

Query: 199 LNEEQLTPKPPSVSHVEASAIPFAALTAWRALKSTARIAEGQRXXXXXXXXXXXLSAIQL 20
           L+E++LT KP SVSHVEASAIPFAALTAWRALKSTARI EGQR            +AIQL
Sbjct: 136 LSEDELTAKPASVSHVEASAIPFAALTAWRALKSTARINEGQRVLIVGGGGAVGFAAIQL 195

Query: 19  AAAAGC 2
           A AAGC
Sbjct: 196 AVAAGC 201


>emb|CBI20237.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  247 bits (631), Expect = 2e-63
 Identities = 127/178 (71%), Positives = 141/178 (79%)
 Frame = -2

Query: 535 RSIVTSCRAVVIPRFGGPEVLQIRSNVQIPDLKPHHVLVRARAVSINPLDTRMRAGYGRS 356
           R IVT+CRAVV+PRFGGP VL++R +  +PDLKP  VLVR RAVSINPLDTRMR+GYGRS
Sbjct: 55  RFIVTTCRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGRS 114

Query: 355 IFGPLLPLILGRDXXXXXXXXXXXVRSLNVGQDVFGALHPTAARGTYADYAILNEEQLTP 176
           IFGPLLPLILGRD           VRSL+VGQ+VFGALHPTA RGTYADYAIL+E++LT 
Sbjct: 115 IFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELTS 174

Query: 175 KPPSVSHVEASAIPFAALTAWRALKSTARIAEGQRXXXXXXXXXXXLSAIQLAAAAGC 2
           KP S+SHVEASAIPFAALTAWRALKSTARIAEGQR            +AIQL  A GC
Sbjct: 175 KPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGC 232


>ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Vitis
           vinifera]
          Length = 361

 Score =  247 bits (631), Expect = 2e-63
 Identities = 127/178 (71%), Positives = 141/178 (79%)
 Frame = -2

Query: 535 RSIVTSCRAVVIPRFGGPEVLQIRSNVQIPDLKPHHVLVRARAVSINPLDTRMRAGYGRS 356
           R IVT+CRAVV+PRFGGP VL++R +  +PDLKP  VLVR RAVSINPLDTRMR+GYGRS
Sbjct: 20  RFIVTTCRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGRS 79

Query: 355 IFGPLLPLILGRDXXXXXXXXXXXVRSLNVGQDVFGALHPTAARGTYADYAILNEEQLTP 176
           IFGPLLPLILGRD           VRSL+VGQ+VFGALHPTA RGTYADYAIL+E++LT 
Sbjct: 80  IFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELTS 139

Query: 175 KPPSVSHVEASAIPFAALTAWRALKSTARIAEGQRXXXXXXXXXXXLSAIQLAAAAGC 2
           KP S+SHVEASAIPFAALTAWRALKSTARIAEGQR            +AIQL  A GC
Sbjct: 140 KPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGC 197


>ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like
           [Glycine max]
          Length = 364

 Score =  246 bits (627), Expect = 5e-63
 Identities = 125/178 (70%), Positives = 144/178 (80%)
 Frame = -2

Query: 535 RSIVTSCRAVVIPRFGGPEVLQIRSNVQIPDLKPHHVLVRARAVSINPLDTRMRAGYGRS 356
           +S V+ CRAV++P FGGP VLQ+RS+V +P LKPH VLVRARAVS+NPLDTRMRAGYGRS
Sbjct: 23  KSYVSDCRAVLLPSFGGPHVLQLRSHVPVPPLKPHDVLVRARAVSVNPLDTRMRAGYGRS 82

Query: 355 IFGPLLPLILGRDXXXXXXXXXXXVRSLNVGQDVFGALHPTAARGTYADYAILNEEQLTP 176
           IF PLLPLILGRD           VRS++VG+ VFGALHPTA RGTY+DYAIL+EE++TP
Sbjct: 83  IFEPLLPLILGRDVSGEVSAVGDKVRSVSVGEQVFGALHPTAVRGTYSDYAILSEEEVTP 142

Query: 175 KPPSVSHVEASAIPFAALTAWRALKSTARIAEGQRXXXXXXXXXXXLSAIQLAAAAGC 2
           KP S++HVEASAIPFAALTAWRALKSTARI+EGQR           LSA+QLA AAGC
Sbjct: 143 KPDSLTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQLAVAAGC 200


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