BLASTX nr result

ID: Coptis24_contig00010670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010670
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23585.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vit...    99   4e-19
ref|XP_003556349.1| PREDICTED: actin-related protein 9-like [Gly...    94   1e-17
ref|XP_003535445.1| PREDICTED: actin-related protein 9-like [Gly...    91   1e-16
ref|XP_002529309.1| conserved hypothetical protein [Ricinus comm...    90   2e-16

>emb|CBI23585.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +1

Query: 70  FRDYKDMLEDTWHMEFSRRPDMPYGLFLNGNGGLSMWDNYPVLPTRLKKNDNIDLVEAIT 249
           F DY+DM EDTWH+EF RR DM  GLF   NGGLSMWDN+PV PT+ K+ + + L EAIT
Sbjct: 456 FHDYEDMPEDTWHIEFPRRTDMSDGLFAGVNGGLSMWDNFPVFPTKPKREEKVGLAEAIT 515

Query: 250 SSILCTGKLLVKLK 291
           SSIL TG++ ++ K
Sbjct: 516 SSILSTGRIDLQRK 529


>ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vitis vinifera]
          Length = 602

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +1

Query: 70  FRDYKDMLEDTWHMEFSRRPDMPYGLFLNGNGGLSMWDNYPVLPTRLKKNDNIDLVEAIT 249
           F DY+DM EDTWH+EF RR DM  GLF   NGGLSMWDN+PV PT+ K+ + + L EAIT
Sbjct: 426 FHDYEDMPEDTWHIEFPRRTDMSDGLFAGVNGGLSMWDNFPVFPTKPKREEKVGLAEAIT 485

Query: 250 SSILCTGKLLVKLK 291
           SSIL TG++ ++ K
Sbjct: 486 SSILSTGRIDLQRK 499


>ref|XP_003556349.1| PREDICTED: actin-related protein 9-like [Glycine max]
          Length = 589

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = +1

Query: 64  TRFRDYKDMLEDTWHMEFSRRPDMPYGLFLNGNGGLSMWDNYPVLPTRLKKNDNIDLVEA 243
           T F DY+DMLEDTWH++FSRR DMP   + N NGGL MW++YPV  T+ KK + + L EA
Sbjct: 411 TWFHDYEDMLEDTWHIDFSRRSDMPDTFYPNVNGGLPMWESYPVFSTKPKKEEKVGLAEA 470

Query: 244 ITSSILCTGKLLVKLK 291
           IT+ IL TG++ ++ K
Sbjct: 471 ITNCILSTGRIDIQRK 486


>ref|XP_003535445.1| PREDICTED: actin-related protein 9-like [Glycine max]
          Length = 591

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = +1

Query: 64  TRFRDYKDMLEDTWHMEFSRRPDMPYGLFLNGNGGLSMWDNYPVLPTRLKKNDNIDLVEA 243
           T F DY+DMLEDTWH++FSRR DM    + N NGGL MW++YPV  T+ KK + + L EA
Sbjct: 413 TWFHDYEDMLEDTWHIDFSRRADMSDTFYPNVNGGLPMWESYPVFSTKPKKEEKVGLAEA 472

Query: 244 ITSSILCTGKLLVKLK 291
           IT+ IL TG++ ++ K
Sbjct: 473 ITNCILSTGRIDIQRK 488


>ref|XP_002529309.1| conserved hypothetical protein [Ricinus communis]
           gi|223531233|gb|EEF33078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = +1

Query: 70  FRDYKDMLEDTWHMEFSRRPDMPYGLFLNGNGGLSMWDNYPVLPTRLKKNDNIDLVEAIT 249
           F DY+DMLEDTWH+E+ RRPDM  GLF     GL MWD+YPV  ++ KK + + L EAIT
Sbjct: 414 FHDYEDMLEDTWHVEYPRRPDMSDGLF-PAFSGLPMWDSYPVFASKPKKEEKVGLAEAIT 472

Query: 250 SSILCTGKLLVKLK 291
           SSIL TG++ +K K
Sbjct: 473 SSILSTGRIDLKRK 486


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