BLASTX nr result

ID: Coptis24_contig00010667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010667
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273089.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-...    86   2e-14
emb|CBI21244.3| unnamed protein product [Vitis vinifera]               86   3e-14
emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]    86   3e-14
emb|CAN63725.1| hypothetical protein VITISV_039588 [Vitis vinifera]    85   5e-14
ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus c...    82   5e-13

>ref|XP_002273089.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Vitis vinifera]
          Length = 681

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 58/157 (36%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
 Frame = -1

Query: 1480 LESKSNRSSQLELYSGMDWETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVG 1301
            +E +   SS L++    D E +    +++S    LPK+GM F+SE+HAY FYN YA  VG
Sbjct: 1    MEDQIQTSSLLDI----DAEQQCHSSEVES-PDGLPKIGMKFESEDHAYRFYNAYAGLVG 55

Query: 1300 FXXXXXXXXXXXXDGTVIRRVLCCSKQGFH---------TKIGLSARTGCEARIIIKRRG 1148
            F            DG+V+ R   C K+GF           K     RTGC A++ I R+ 
Sbjct: 56   FSVRKDFKNRSKIDGSVMSRRFVCFKRGFRLPDKRNLNVKKPHKEVRTGCLAQMTISRQS 115

Query: 1147 -GNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 1040
             G + +      HNHE+V P  VH L S RK   SQA
Sbjct: 116  DGRYRVIHFEANHNHEVVGPEYVHALPSHRKLTVSQA 152


>emb|CBI21244.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 60/164 (36%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
 Frame = -1

Query: 1483 HLESKSNRSSQLELYSGMDWE------TKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYN 1322
            HLE   N   + +   G  ++      +     DID V    PKVGM F+SE+ AY FYN
Sbjct: 43   HLEVNCNLEQECDSPKGAQFDLMQSRLSLENEDDIDEV----PKVGMEFESEDDAYVFYN 98

Query: 1321 QYAKTVGFXXXXXXXXXXXXDGTVIRRVLCCSKQGFHTK----IGL-----SARTGCEAR 1169
            +YAK VGF            +GTV+ R   C K+G+  K    I +       RTGC A+
Sbjct: 99   RYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFKEGYRRKDKRDINVKKPRKQTRTGCLAQ 158

Query: 1168 IIIKRR-GGNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 1040
            + I R+  G + +      HNHE V P  VH L SQR+   SQA
Sbjct: 159  MTISRQPNGKYRVIHFEAKHNHEGVGPHLVHMLPSQRRLAFSQA 202


>emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]
          Length = 481

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 60/164 (36%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
 Frame = -1

Query: 1483 HLESKSNRSSQLELYSGMDWE------TKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYN 1322
            HLE   N   + +   G  ++      +     DID V    PKVGM F+SE+ AY FYN
Sbjct: 21   HLEVNCNLEQECDSPKGAQFDLMQSRLSLENEDDIDEV----PKVGMEFESEDDAYVFYN 76

Query: 1321 QYAKTVGFXXXXXXXXXXXXDGTVIRRVLCCSKQGFHTK----IGL-----SARTGCEAR 1169
            +YAK VGF            +GTV+ R   C K+G+  K    I +       RTGC A+
Sbjct: 77   RYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFKEGYRRKDKRDINVKKPRKQTRTGCLAQ 136

Query: 1168 IIIKRR-GGNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 1040
            + I R+  G + +      HNHE V P  VH L SQR+   SQA
Sbjct: 137  MTISRQPNGKYRVIHFEAKHNHEGVGPHLVHMLPSQRRLAFSQA 180


>emb|CAN63725.1| hypothetical protein VITISV_039588 [Vitis vinifera]
          Length = 720

 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 57/156 (36%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
 Frame = -1

Query: 1477 ESKSNRSSQLELYSGMDWETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGF 1298
            E K     Q      +D E +    + +S    LPK+GM F+SE+HAY FYN YA  VGF
Sbjct: 37   EGKMEDQIQTSSLLDIDAEQQCHXSEXES-PDGLPKIGMKFESEDHAYXFYNAYAGLVGF 95

Query: 1297 XXXXXXXXXXXXDGTVIRRVLCCSKQGFH---------TKIGLSARTGCEARIIIKRRG- 1148
                        DG+V+ R   C K+GF           K     RTGC A++ I R+  
Sbjct: 96   SVRKDFKNRSKIDGSVMSRRFVCFKRGFRXPDKRNLNVKKPHKEVRTGCLAQMTISRQSD 155

Query: 1147 GNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 1040
            G + +      HNHE+V P  VH L S RK   SQA
Sbjct: 156  GRYRVIHFEANHNHEVVGPEYVHALPSHRKLTVSQA 191


>ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus communis]
            gi|223533689|gb|EEF35424.1| hypothetical protein
            RCOM_0530880 [Ricinus communis]
          Length = 367

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
 Frame = -1

Query: 1396 DSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXDGTVIRRVLCCSKQG 1217
            D V   +PK+GM F+SE+HAY+FYN YA  VGF            DG V  R   C ++G
Sbjct: 227  DFVMDGVPKLGMGFESEDHAYEFYNAYAGQVGFSVRKDYVNRSKIDGAVASRRFTCFREG 286

Query: 1216 FHTK---------IGLSARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAPSEVHRLRS 1067
            F  K              R GC A+++I R+    + +T   + HNHELVA  +V  LRS
Sbjct: 287  FRQKDKRDLNVKRPRKETRIGCTAQLVISRQPDSKYRVTHFEKKHNHELVAVCKVRTLRS 346

Query: 1066 QRKFEDSQ 1043
            Q++   +Q
Sbjct: 347  QKRLATAQ 354



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
 Frame = -1

Query: 1423 ETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXDGTVIR 1244
            E   G  + +  T+  PKVGM F++E+HAY  Y++YA   GF            +G V+ 
Sbjct: 83   EADVGLKNEEEETYVAPKVGMEFETEDHAYKCYSRYAVLQGFSIRKDFVNKSRLNGDVVS 142

Query: 1243 RVLCCSKQGFH--------TKIGLSARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAP 1091
            R   C KQG+          K     RTGC A++ I R+  G F +T     HNHE +AP
Sbjct: 143  RRYTCYKQGYRPANHIAKVRKPRQETRTGCLAQMTIARQPNGKFRVTRFVTQHNHEFLAP 202

Query: 1090 SEVHRLRSQRKFEDSQA 1040
            S  H L SQ++   +QA
Sbjct: 203  STAHMLPSQKRLTFAQA 219


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