BLASTX nr result

ID: Coptis24_contig00010665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010665
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-56
ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 h...   160   1e-54
gb|AFK43861.1| unknown [Lotus japonicus]                              159   2e-52
ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 h...   162   3e-52
ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 h...   154   5e-52

>ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|222853401|gb|EEE90948.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  174 bits (440), Expect(2) = 2e-56
 Identities = 79/110 (71%), Positives = 93/110 (84%)
 Frame = +1

Query: 1   YESCTDRTPSRPPTFFLALRKWYSSFHPEMEFRCFVQNQHLIAVCQREVTGFYPVLLEKK 180
           Y+SC D+T  RPP+FFLALRKWYSSF PEMEFRCFV+ Q L+ + QREVT FYP LLE+K
Sbjct: 154 YDSCIDKTLLRPPSFFLALRKWYSSFLPEMEFRCFVRGQQLVGISQREVTTFYPTLLEEK 213

Query: 181 CDLEILIQDFFEKNVQQKFESVNYTFDVYVTRDKRVKLLDFNPWAPFTLP 330
            DLE+LI++FF +NV+QKFES NYTFDVYVT+D R K+LDFNPW  FTLP
Sbjct: 214 NDLELLIKEFFTENVRQKFESENYTFDVYVTKDGRAKILDFNPWGAFTLP 263



 Score = 71.6 bits (174), Expect(2) = 2e-56
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = +2

Query: 449 CAVRPSLKTAVPYDYLDTSPGSGWDQFLRRADEELQKQDTHEG 577
           C +RP LKTAVP DYLDT PGSGWDQFLR+AD+ELQ+Q    G
Sbjct: 291 CGIRPGLKTAVPQDYLDTGPGSGWDQFLRKADKELQQQKMAPG 333


>ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 homolog [Glycine max]
          Length = 332

 Score =  160 bits (405), Expect(2) = 1e-54
 Identities = 74/109 (67%), Positives = 87/109 (79%)
 Frame = +1

Query: 1   YESCTDRTPSRPPTFFLALRKWYSSFHPEMEFRCFVQNQHLIAVCQREVTGFYPVLLEKK 180
           Y+SC D++ +RP  FFLALRKWY S  P+MEFRCFV+NQ LI + QREVT FYPVLLEKK
Sbjct: 153 YDSCQDKSSTRPQNFFLALRKWYPSLQPDMEFRCFVRNQKLIGISQREVTTFYPVLLEKK 212

Query: 181 CDLEILIQDFFEKNVQQKFESVNYTFDVYVTRDKRVKLLDFNPWAPFTL 327
            DL  LIQ FF  +V+ KFES NYTFDVY+T+D RVK++DFNPW  FTL
Sbjct: 213 NDLLFLIQAFFINHVRAKFESENYTFDVYITKDDRVKIVDFNPWGAFTL 261



 Score = 79.0 bits (193), Expect(2) = 1e-54
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +2

Query: 449 CAVRPSLKTAVPYDYLDTSPGSGWDQFLRRADEELQKQDTHEG 577
           CAVRP LKTAVP+DYLDTSPGSGWDQFLR ADEEL++Q T  G
Sbjct: 289 CAVRPGLKTAVPFDYLDTSPGSGWDQFLRNADEELRRQSTGAG 331


>gb|AFK43861.1| unknown [Lotus japonicus]
          Length = 335

 Score =  159 bits (401), Expect(2) = 2e-52
 Identities = 71/109 (65%), Positives = 88/109 (80%)
 Frame = +1

Query: 1   YESCTDRTPSRPPTFFLALRKWYSSFHPEMEFRCFVQNQHLIAVCQREVTGFYPVLLEKK 180
           Y+SC D++ SRP  FFLALRKWY S  P+MEFRCFV+ Q L+ + QREVT FYP+LLEKK
Sbjct: 154 YDSCQDKSSSRPQNFFLALRKWYPSLKPDMEFRCFVREQKLVGISQREVTTFYPILLEKK 213

Query: 181 CDLEILIQDFFEKNVQQKFESVNYTFDVYVTRDKRVKLLDFNPWAPFTL 327
            DL +L+Q FF   V+ +FES NYTFDVY+T+D+RVK++DFNPWA FTL
Sbjct: 214 NDLLLLMQGFFNNYVRTRFESENYTFDVYITKDERVKVVDFNPWASFTL 262



 Score = 72.8 bits (177), Expect(2) = 2e-52
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 449 CAVRPSLKTAVPYDYLDTSPGSGWDQFLRRADEELQKQ 562
           C VRP LKTAVPYDYLDTS GSGWDQFLR ADEEL++Q
Sbjct: 290 CGVRPGLKTAVPYDYLDTSAGSGWDQFLRNADEELRRQ 327


>ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 385

 Score =  162 bits (409), Expect(2) = 3e-52
 Identities = 73/110 (66%), Positives = 88/110 (80%)
 Frame = +1

Query: 1   YESCTDRTPSRPPTFFLALRKWYSSFHPEMEFRCFVQNQHLIAVCQREVTGFYPVLLEKK 180
           Y+SC+D++ SRPP F+LALRKWY S  PEMEFRCFV+++ L+ + QREVTGFYP LLEKK
Sbjct: 154 YDSCSDKSLSRPPNFYLALRKWYPSLRPEMEFRCFVRDRLLVGISQREVTGFYPALLEKK 213

Query: 181 CDLEILIQDFFEKNVQQKFESVNYTFDVYVTRDKRVKLLDFNPWAPFTLP 330
             LE++I++FF   V Q FE  NYTFDVYVT D RVKL+DFNPW  FTLP
Sbjct: 214 SALEVVIREFFMDKVSQTFELENYTFDVYVTMDDRVKLVDFNPWGAFTLP 263



 Score = 69.3 bits (168), Expect(2) = 3e-52
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = +2

Query: 452 AVRPSLKTAVPYDYLDTSPGSGWDQFLRRADEELQKQDTHEGKEFQR 592
           AVRP LKTAVPYDYL T PGSGWDQFLR AD+EL++Q   +    Q+
Sbjct: 292 AVRPGLKTAVPYDYLATGPGSGWDQFLRNADQELERQTRRDRPGLQK 338


>ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 338

 Score =  154 bits (390), Expect(2) = 5e-52
 Identities = 71/110 (64%), Positives = 84/110 (76%)
 Frame = +1

Query: 1   YESCTDRTPSRPPTFFLALRKWYSSFHPEMEFRCFVQNQHLIAVCQREVTGFYPVLLEKK 180
           Y+SC D++ SRP  F+LALRKWY S  PEMEFRCFV++  L+ + QREVTGFYP LLEKK
Sbjct: 154 YDSCIDKSLSRPANFYLALRKWYPSLRPEMEFRCFVRDGCLVGISQREVTGFYPGLLEKK 213

Query: 181 CDLEILIQDFFEKNVQQKFESVNYTFDVYVTRDKRVKLLDFNPWAPFTLP 330
            DLE++I+ FF   V   FE  NYTFDVYV +D RVKL+DFNPW  FTLP
Sbjct: 214 NDLEVVIRQFFLDKVSPSFELANYTFDVYVKKDDRVKLVDFNPWGAFTLP 263



 Score = 75.9 bits (185), Expect(2) = 5e-52
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = +2

Query: 449 CAVRPSLKTAVPYDYLDTSPGSGWDQFLRRADEELQKQ 562
           CAVRP LKTAVPYDYLD SPGSGWDQFLR AD+ELQ+Q
Sbjct: 293 CAVRPGLKTAVPYDYLDVSPGSGWDQFLRNADQELQRQ 330


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