BLASTX nr result

ID: Coptis24_contig00010663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010663
         (2062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243...   427   e-117
emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]   427   e-117
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258...   426   e-116
ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, ...   421   e-115
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211...   419   e-114

>ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243393 [Vitis vinifera]
          Length = 463

 Score =  427 bits (1097), Expect = e-117
 Identities = 235/400 (58%), Positives = 274/400 (68%), Gaps = 13/400 (3%)
 Frame = +1

Query: 880  PVSKLLEPFTKEQLIEILQLAADNHEDVLENIRKISDTDPVHRKIFVHGLGWDTNSEILT 1059
            P+ K+LEPF+K+QLI +L+ AA+ H DV E +R+++D DPVHRKIFVHGLGWDTN+E L 
Sbjct: 76   PIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIFVHGLGWDTNAETLI 135

Query: 1060 SVFKKYGEIEECNAVTDKMTGKSKGYAFILFKRRSGARKALKEPQKKIGSRMTACQLASA 1239
            SVFK YGEIE+C AV DK++GKSKGY FILFK RSGARKALK+PQKKIG+RMTACQLAS 
Sbjct: 136  SVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLASI 195

Query: 1240 GPVPNQPV-QAHVHAHAQPVLPAVAVSEYTQRKIYVSNVSADIDPQKLLGFFAKFGEVEE 1416
            GPVP+  V QA     A  V  A +VSEYTQRKIYVSNV A++DPQKLL FF+K+GE+EE
Sbjct: 196  GPVPSPAVGQA-----AMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVFFSKYGEIEE 250

Query: 1417 GPLGMDKQTGKPKGFALFVYKSVESAKKALEEPHKSFEGHILHCQKAIDGPKPIK-PHFQ 1593
            GPLG+DKQTGKPKGF LFVYK+ E AKKAL+EPHK+F+GHILHCQKAIDGPKP K    Q
Sbjct: 251  GPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKAIDGPKPGKQQQLQ 310

Query: 1594 QHSHGGGRPSKFPQIDKFNYXXXXXXXXXXXXXXLMAQSAGPGMAYSQG-ASPALNPVLG 1770
            Q  H    P+        +Y              LMA S  P + Y+QG A+ ALNP LG
Sbjct: 311  QQQHHHNLPNT-------HYTKSEITNFMGPQGHLMAPSGPPAIPYNQGSAAQALNPALG 363

Query: 1771 QALTAFIASQ--XXXXXXXXXXXXXXXXXXXVNPV---AQPMMQGGYSNQYV----GTGY 1923
            QALTA +A+Q                     VNP    A   MQGGY NQ V     +G 
Sbjct: 364  QALTALLATQGAGLGLTNLLGTLGSASVGAAVNPSVAGAGHGMQGGYPNQAVAGNISSGM 423

Query: 1924 ASQPGMHGGYSHTQAGQG-SSGRSQKGAGHMGGMNPFMGH 2040
                G  G Y + Q GQG SSGRSQ G GHMGGM P+MGH
Sbjct: 424  VGGYGSQGAYGNQQMGQGSSSGRSQHGVGHMGGMAPYMGH 463


>emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]
          Length = 463

 Score =  427 bits (1097), Expect = e-117
 Identities = 235/400 (58%), Positives = 274/400 (68%), Gaps = 13/400 (3%)
 Frame = +1

Query: 880  PVSKLLEPFTKEQLIEILQLAADNHEDVLENIRKISDTDPVHRKIFVHGLGWDTNSEILT 1059
            P+ K+LEPF+K+QLI +L+ AA+ H DV E +R+++D DPVHRKIFVHGLGWDTN+E L 
Sbjct: 76   PIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKIFVHGLGWDTNAETLI 135

Query: 1060 SVFKKYGEIEECNAVTDKMTGKSKGYAFILFKRRSGARKALKEPQKKIGSRMTACQLASA 1239
            SVFK YGEIE+C AV DK++GKSKGY FILFK RSGARKALK+PQKKIG+RMTACQLAS 
Sbjct: 136  SVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLASI 195

Query: 1240 GPVPNQPV-QAHVHAHAQPVLPAVAVSEYTQRKIYVSNVSADIDPQKLLGFFAKFGEVEE 1416
            GPVP+  V QA     A  V  A +VSEYTQRKIYVSNV A++DPQKLL FF+K+GE+EE
Sbjct: 196  GPVPSPAVGQA-----AMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLVFFSKYGEIEE 250

Query: 1417 GPLGMDKQTGKPKGFALFVYKSVESAKKALEEPHKSFEGHILHCQKAIDGPKPIK-PHFQ 1593
            GPLG+DKQTGKPKGF LFVYK+ E AKKAL+EPHK+F+GHILHCQKAIDGPKP K    Q
Sbjct: 251  GPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKAIDGPKPGKQQQLQ 310

Query: 1594 QHSHGGGRPSKFPQIDKFNYXXXXXXXXXXXXXXLMAQSAGPGMAYSQG-ASPALNPVLG 1770
            Q  H    P+        +Y              LMA S  P + Y+QG A+ ALNP LG
Sbjct: 311  QQQHHHNLPNT-------HYTKSEITNFMGPQGHLMAPSGPPAIPYNQGSAAQALNPALG 363

Query: 1771 QALTAFIASQ--XXXXXXXXXXXXXXXXXXXVNPV---AQPMMQGGYSNQYV----GTGY 1923
            QALTA +A+Q                     VNP    A   MQGGY NQ V     +G 
Sbjct: 364  QALTALLATQGAGLGLTNLLGTLGSASVGAAVNPSVAGAGHGMQGGYPNQAVAGNISSGM 423

Query: 1924 ASQPGMHGGYSHTQAGQG-SSGRSQKGAGHMGGMNPFMGH 2040
                G  G Y + Q GQG SSGRSQ G GHMGGM P+MGH
Sbjct: 424  VGGYGSQGAYGNQQMGQGSSSGRSQHGVGHMGGMAPYMGH 463


>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
            vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
            uncharacterized protein LOC100258161 isoform 2 [Vitis
            vinifera] gi|147853236|emb|CAN80681.1| hypothetical
            protein VITISV_037734 [Vitis vinifera]
          Length = 478

 Score =  426 bits (1094), Expect = e-116
 Identities = 231/391 (59%), Positives = 272/391 (69%), Gaps = 5/391 (1%)
 Frame = +1

Query: 883  VSKLLEPFTKEQLIEILQLAADNHEDVLENIRKISDTDPVHRKIFVHGLGWDTNSEILTS 1062
            + KLLEPF+KEQL+ +L+ A + + D ++++R+++D DP HRKIFVHGLGWDT +E LTS
Sbjct: 116  IEKLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTS 175

Query: 1063 VFKKYGEIEECNAVTDKMTGKSKGYAFILFKRRSGARKALKEPQKKIGSRMTACQLASAG 1242
            VF KYGEIE+C AV+DK++GKSKGYAFILFK RSGARKALK+PQKKIG+RMT+CQLASAG
Sbjct: 176  VFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAG 235

Query: 1243 PVPNQPVQAHVHAHAQPVLPAVAVSEYTQRKIYVSNVSADIDPQKLLGFFAKFGEVEEGP 1422
            PVP  P          PV+P   VSEYTQRKI+VSNVS++IDPQKLL FFAKFGE+EEGP
Sbjct: 236  PVPAPP----------PVVP--PVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGP 283

Query: 1423 LGMDKQTGKPKGFALFVYKSVESAKKALEEPHKSFEGHILHCQKAIDGPKPIKP-HFQQH 1599
            LG+DK TGKPKGFALFVYKS+ES+++ALEEPHK FEGH LHCQKAIDGPKP KP H   H
Sbjct: 284  LGLDKSTGKPKGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAIDGPKPNKPFHHHHH 343

Query: 1600 SHGGGRPSKFPQIDKFNYXXXXXXXXXXXXXXLMAQSAGPGMAYSQGASPALNPVLGQAL 1779
             H    PS+    DK  Y              LMA S GP M  + G +PALNP LGQAL
Sbjct: 344  QHQPHYPSR---KDKSKY-----SANAAGPGHLMAPS-GPSMTLNPGVAPALNPALGQAL 394

Query: 1780 TAFIASQ--XXXXXXXXXXXXXXXXXXXVNPVAQPM--MQGGYSNQYVGTGYASQPGMHG 1947
            TA +ASQ                     + P A  M  MQGGY NQ  G+ Y SQPGM G
Sbjct: 395  TALLASQGAGLGLTNLLGGLGGAPVNQAMPPAAHGMQGMQGGYGNQGAGS-YGSQPGMQG 453

Query: 1948 GYSHTQAGQGSSGRSQKGAGHMGGMNPFMGH 2040
            GY + Q GQ S GR Q+G        P+MGH
Sbjct: 454  GYQNPQMGQASGGRPQQGGA------PYMGH 478


>ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223531017|gb|EEF32870.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 462

 Score =  421 bits (1083), Expect = e-115
 Identities = 229/391 (58%), Positives = 269/391 (68%), Gaps = 4/391 (1%)
 Frame = +1

Query: 880  PVSKLLEPFTKEQLIEILQLAADNHEDVLENIRKISDTDPVHRKIFVHGLGWDTNSEILT 1059
            P+ KLLEPF KEQLI +L+ AAD H DV ++IRKI+D DPVHRKIFVHGLGWDT++E LT
Sbjct: 87   PIEKLLEPFGKEQLINLLREAADTHRDVADHIRKIADADPVHRKIFVHGLGWDTSAETLT 146

Query: 1060 SVFKKYGEIEECNAVTDKMTGKSKGYAFILFKRRSGARKALKEPQKKIGSRMTACQLASA 1239
            + FK+YGEIE+C AV DK++GKSKGY FILFK+RSGARKAL+EPQKKIG+RMTACQLAS 
Sbjct: 147  NAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQEPQKKIGNRMTACQLASI 206

Query: 1240 GPVP-NQPVQAHVHAHAQPVLPAVAVSEYTQRKIYVSNVSADIDPQKLLGFFAKFGEVEE 1416
            GPVP  Q   + V     P      VS+YT+RKIYVSNV+AD+DP++L  FF+KFGE+EE
Sbjct: 207  GPVPVGQAAASAVTTSHHP--QHQQVSDYTRRKIYVSNVAADLDPKELTNFFSKFGEIEE 264

Query: 1417 GPLGMDKQTGKPKGFALFVYKSVESAKKALEEPHKSFEGHILHCQKAIDGPKPIKPHFQQ 1596
            GPLG+DK TGKPKGF LFVYKS ESAK+ALEEPHKSFEGH+LHCQKAIDGPK  KP  QQ
Sbjct: 265  GPLGLDKLTGKPKGFCLFVYKSAESAKRALEEPHKSFEGHMLHCQKAIDGPKHGKPQQQQ 324

Query: 1597 HSHGGGRPSKFPQIDKFNYXXXXXXXXXXXXXXLMAQSA-GPGMAYSQGA--SPALNPVL 1767
              H   + S F +    N               LMA +A GPG+ +++GA  +PALNP L
Sbjct: 325  QQHYNAQKSHFQR----NGNPGYSGGTASGPSHLMAPAAGGPGIGFNEGAAGAPALNPAL 380

Query: 1768 GQALTAFIASQXXXXXXXXXXXXXXXXXXXVNPVAQPMMQGGYSNQYVGTGYASQPGMHG 1947
            GQALTA +A+Q                     P A P MQ  Y NQ     Y  Q  MHG
Sbjct: 381  GQALTALLATQGAGLGLNLLGTLGSAAGL---PAAAPGMQNPYGNQ--AGSYGHQGVMHG 435

Query: 1948 GYSHTQAGQGSSGRSQKGAGHMGGMNPFMGH 2040
             Y      QGSSGR Q GAG  GG+ P+MGH
Sbjct: 436  TY----PSQGSSGRGQHGAGQYGGVGPYMGH 462


>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
            gi|449503048|ref|XP_004161816.1| PREDICTED:
            uncharacterized protein LOC101228786 [Cucumis sativus]
          Length = 500

 Score =  419 bits (1077), Expect = e-114
 Identities = 228/395 (57%), Positives = 268/395 (67%), Gaps = 8/395 (2%)
 Frame = +1

Query: 880  PVSKLLEPFTKEQLIEILQLAADNHEDVLENIRKISDTDPVHRKIFVHGLGWDTNSEILT 1059
            P+ KLLEPFTK+QLI +L+ AAD H DV   IR ++D DP HRKIFVHGLGWDTN+E L 
Sbjct: 125  PIHKLLEPFTKDQLINLLREAADKHVDVAGRIRMVADADPSHRKIFVHGLGWDTNAETLI 184

Query: 1060 SVFKKYGEIEECNAVTDKMTGKSKGYAFILFKRRSGARKALKEPQKKIGSRMTACQLASA 1239
            +VFK++GEIE+C AV DK++GKSKGY FILFK+RSGARKALKEPQKKIG+RMTACQLAS 
Sbjct: 185  NVFKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASV 244

Query: 1240 GPVPNQPVQAHVHAHAQPVLPAVAVSEYTQRKIYVSNVSADIDPQKLLGFFAKFGEVEEG 1419
            GPVP        +A A P +P    SEYTQRKIYVSNV AD+DPQKLL FF++FGEV+EG
Sbjct: 245  GPVPT------TNAVAAPQVP--PASEYTQRKIYVSNVGADVDPQKLLAFFSQFGEVDEG 296

Query: 1420 PLGMDKQTGKPKGFALFVYKSVESAKKALEEPHKSFEGHILHCQKAIDGPKPIKPHFQQH 1599
            PLG+DK TGKPKGF LFVYKS+ESAKKALEEPHK+FEGH+LHCQKAIDGPKP K   Q H
Sbjct: 297  PLGLDKMTGKPKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKAIDGPKPGKAQHQHH 356

Query: 1600 SHGGGRPSKFPQIDKFNYXXXXXXXXXXXXXXLMAQSAGPGMAYSQGASPALNPVLGQAL 1779
            +      + F +    NY              LMA  AGPG+ Y+QG    LNP +GQAL
Sbjct: 357  TPN----APFQRNKNPNY----TGGAASGSGHLMA-PAGPGVGYNQGPPQGLNPAIGQAL 407

Query: 1780 TAFIASQXXXXXXXXXXXXXXXXXXXVNPVAQ---PMMQGGYSNQYVGT----GYASQPG 1938
            TA +A Q                   +NP  Q   P +Q GY +Q   +    GY SQ G
Sbjct: 408  TALLAGQ--GAGLGLTNLLGTLGTAGLNPAVQGAGPGVQSGYGSQANISPGVIGYGSQSG 465

Query: 1939 MHGGYSHTQAGQGSSGR-SQKGAGHMGGMNPFMGH 2040
            + GGY + Q GQG +GR  Q G G  GG   +MGH
Sbjct: 466  VQGGYPNQQMGQGGAGRGGQHGVGQYGGPGGYMGH 500


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