BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010656
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   224   6e-57
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   211   4e-53
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   196   1e-48
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   194   5e-48
ref|XP_003558802.1| PREDICTED: cytochrome c biogenesis protein C...   191   7e-47

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  224 bits (571), Expect = 6e-57
 Identities = 111/150 (74%), Positives = 122/150 (81%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3   KFILSEGAPKLPEDVGNNDDVQPKLISSDGGGVLRF---VKRVPRRALSILSNLPLAIGE 173
           K +LSEGAP + ED   N + QPK  S  GGG   F   VKR PR+ LS LSNLPLAIGE
Sbjct: 66  KIVLSEGAPAVSEDGAGNGEAQPKPASKGGGGGGGFGGLVKRFPRKVLSRLSNLPLAIGE 125

Query: 174 MFTIAALMALGTAIDQGEAPGYYFQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGML 353
           MFT+AALMALGTAIDQGEAP YYFQ++PED+PVLGF TWRWVL  GFDHMF+SP+FLGML
Sbjct: 126 MFTVAALMALGTAIDQGEAPDYYFQKFPEDNPVLGFFTWRWVLTLGFDHMFSSPIFLGML 185

Query: 354 ILLAASLMACTYTTQIPIVKVARRWKFLHS 443
            LLA SLMACTYTTQIP+VKVARRW FLHS
Sbjct: 186 ALLATSLMACTYTTQIPLVKVARRWNFLHS 215


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/149 (69%), Positives = 118/149 (79%), Gaps = 2/149 (1%)
 Frame = +3

Query: 3   KFILSEGAPKLPED--VGNNDDVQPKLISSDGGGVLRFVKRVPRRALSILSNLPLAIGEM 176
           K +LS  AP + E+   GNN ++ P   +  GGG LRF KR+PR+ LS+LSNLPLAIGEM
Sbjct: 66  KILLSNSAPPVSEEGGAGNNGEI-PDKAAKGGGGPLRFFKRLPRKVLSVLSNLPLAIGEM 124

Query: 177 FTIAALMALGTAIDQGEAPGYYFQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLI 356
           F IA LMALGT IDQG+AP  YFQ YPE++PVLGF TWRW+L  GFDHMF+SPVFLGML 
Sbjct: 125 FAIAGLMALGTVIDQGQAPEIYFQNYPEENPVLGFFTWRWILTLGFDHMFSSPVFLGMLA 184

Query: 357 LLAASLMACTYTTQIPIVKVARRWKFLHS 443
           LL  SLMACTYTTQIP+VKVARRW FLHS
Sbjct: 185 LLGLSLMACTYTTQIPLVKVARRWNFLHS 213


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/149 (65%), Positives = 114/149 (76%), Gaps = 2/149 (1%)
 Frame = +3

Query: 3   KFILSEGAPK-LPEDVGNNDDVQPKLISSDG-GGVLRFVKRVPRRALSILSNLPLAIGEM 176
           K +LSE +P  L ED  NN D +    SS   GG+      + R+ L ILSNLPLAIGEM
Sbjct: 73  KIVLSEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVANMLRRKTLQILSNLPLAIGEM 132

Query: 177 FTIAALMALGTAIDQGEAPGYYFQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLI 356
           F +A+LMALGT IDQGEAP +YFQ+YPEDHPV GF TWRWVL  GFDHMFTSP+FLG+L 
Sbjct: 133 FAVASLMALGTFIDQGEAPDFYFQKYPEDHPVFGFFTWRWVLTLGFDHMFTSPIFLGVLA 192

Query: 357 LLAASLMACTYTTQIPIVKVARRWKFLHS 443
           LL ASLMACTYTTQ+P++KV+RRW FLHS
Sbjct: 193 LLGASLMACTYTTQLPLIKVSRRWSFLHS 221


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3   KFILSEGAPKLPEDVGNND-DVQPKLISSDGGGVLRFVKRVPRRALSILSNLPLAIGEMF 179
           K +LSE AP L E+  +   + + ++   +G   ++ VKR+P+R L  LSNLPLAIGEMF
Sbjct: 72  KIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLAIGEMF 131

Query: 180 TIAALMALGTAIDQGEAPGYYFQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLIL 359
           TIAALMALGT IDQGEAP +YFQ+YPED+P+ GF  WRW+L  GFDHM++S +FLGML L
Sbjct: 132 TIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSSTIFLGMLAL 191

Query: 360 LAASLMACTYTTQIPIVKVARRWKFLHS 443
           L  SLMACTYTTQIP+VKVARRW FL S
Sbjct: 192 LGISLMACTYTTQIPLVKVARRWNFLQS 219


>ref|XP_003558802.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 555

 Score =  191 bits (484), Expect = 7e-47
 Identities = 90/147 (61%), Positives = 110/147 (74%)
 Frame = +3

Query: 3   KFILSEGAPKLPEDVGNNDDVQPKLISSDGGGVLRFVKRVPRRALSILSNLPLAIGEMFT 182
           + +  + AP L +  G  +    K      G  LR ++R  +R LS+LSNLPLAI EMF 
Sbjct: 65  RVVFFDAAPPLAQQSGGEEGKVKKAEPKQDGAALRLLRRATKRTLSVLSNLPLAITEMFA 124

Query: 183 IAALMALGTAIDQGEAPGYYFQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILL 362
           IA LMALGT IDQGEAP YY +++PED+PVLGFITWRW+L  GFDHMF+SPVFLG+L LL
Sbjct: 125 IAGLMALGTVIDQGEAPSYYLEKFPEDNPVLGFITWRWILTPGFDHMFSSPVFLGLLALL 184

Query: 363 AASLMACTYTTQIPIVKVARRWKFLHS 443
           AASLMACTYTTQ+P+VKVA+RW F+ S
Sbjct: 185 AASLMACTYTTQLPMVKVAKRWSFMSS 211