BLASTX nr result

ID: Coptis24_contig00010651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010651
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308177.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_002322919.1| predicted protein [Populus trichocarpa] gi|2...    93   8e-17
ref|XP_003632668.1| PREDICTED: uncharacterized protein LOC100261...    90   5e-16
ref|NP_001235013.1| uncharacterized protein LOC100305924 [Glycin...    89   1e-15
emb|CBI30503.3| unnamed protein product [Vitis vinifera]               87   6e-15

>ref|XP_002308177.1| predicted protein [Populus trichocarpa] gi|222854153|gb|EEE91700.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
 Frame = -3

Query: 682 MEGLIPFVYKVIVQYKR---APITGSWFDESPSASYMRLPGDSGRLQAPDIELFRTHNIF 512
           MEGLIPFVY+ I+QYK    A   GSWF+ESPSASYMRLPGDSGR Q  DI +F +   F
Sbjct: 1   MEGLIPFVYRAIIQYKNGKEAGPLGSWFNESPSASYMRLPGDSGRFQTSDIRIFGSDYGF 60

Query: 511 SSSTPSSLVPTASTSQL-LSATAQSPLSC 428
           S+S+ SS    +ST+Q+ +S  AQSPL+C
Sbjct: 61  STSSTSSSNMNSSTTQITVSTGAQSPLNC 89


>ref|XP_002322919.1| predicted protein [Populus trichocarpa] gi|222867549|gb|EEF04680.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
 Frame = -3

Query: 682 MEGLIPFVYKVIVQY---KRAPITGSWFDESPSASYMRLPGDSGRLQAPDIELFRTHNIF 512
           MEGLIPFVY+ I+Q+   K A   GSWF ESPSASYMRLPGDSGR Q  D+ +  + + F
Sbjct: 1   MEGLIPFVYRAIMQFNNGKEAGPLGSWFSESPSASYMRLPGDSGRFQKSDLRILGSDHGF 60

Query: 511 SSSTPSSLVPTASTSQLLSATAQSPLSC 428
           S+S+ SS   +++T  ++S  AQ+PL+C
Sbjct: 61  SNSSTSSNTHSSTTQIIVSTGAQAPLNC 88


>ref|XP_003632668.1| PREDICTED: uncharacterized protein LOC100261261 [Vitis vinifera]
          Length = 92

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = -3

Query: 682 MEGLIPFVYKVIVQYKRAPITGSWFDESPSASYMRLPGDSGRLQAPDIELFRTHNIFSSS 503
           MEGLIPFVY+ IVQYK      SW  ESPS SY+ LPGDSGR Q  DI+LFR+   FS++
Sbjct: 1   MEGLIPFVYRAIVQYKNGG-QRSWLSESPSCSYILLPGDSGRFQTSDIQLFRSDYAFSAT 59

Query: 502 TPSSLVPTASTSQLLSATAQSP 437
           + SS+ P+A+   ++S   QSP
Sbjct: 60  SSSSMAPSANAKIMVSTGVQSP 81


>ref|NP_001235013.1| uncharacterized protein LOC100305924 [Glycine max]
           gi|255626995|gb|ACU13842.1| unknown [Glycine max]
          Length = 95

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
 Frame = -3

Query: 682 MEGLIPFVYKVIVQYK---RAPITGSWFDESPSASYMRLPGDSGRLQAPDIELFRTHNIF 512
           MEGLIPFVYK I+QYK   + PI GSW  ESPS SYM+LPGDSGR       L  +   F
Sbjct: 1   MEGLIPFVYKAIMQYKNGKQGPI-GSWLCESPSYSYMKLPGDSGRFHTSASSLIGSDYGF 59

Query: 511 SSSTPSSLVPTASTSQLLSATAQSPLSC 428
           S+S+PSS++ T+ST  ++S++ QSP  C
Sbjct: 60  SASSPSSMLATSSTQIIVSSSVQSPHRC 87


>emb|CBI30503.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 43/82 (52%), Positives = 56/82 (68%)
 Frame = -3

Query: 682 MEGLIPFVYKVIVQYKRAPITGSWFDESPSASYMRLPGDSGRLQAPDIELFRTHNIFSSS 503
           + GLIPFVY+ IVQYK      SW  ESPS SY+ LPGDSGR Q  DI+LFR+   FS++
Sbjct: 74  VHGLIPFVYRAIVQYKNGG-QRSWLSESPSCSYILLPGDSGRFQTSDIQLFRSDYAFSAT 132

Query: 502 TPSSLVPTASTSQLLSATAQSP 437
           + SS+ P+A+   ++S   QSP
Sbjct: 133 SSSSMAPSANAKIMVSTGVQSP 154


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