BLASTX nr result

ID: Coptis24_contig00010648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010648
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22260.3| unnamed protein product [Vitis vinifera]              138   1e-30
ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [C...   138   2e-30
ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|2...   136   6e-30
gb|ABK94415.1| unknown [Populus trichocarpa]                          135   1e-29
gb|AFK46465.1| unknown [Lotus japonicus]                              131   1e-28

>emb|CBI22260.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score =  138 bits (348), Expect = 1e-30
 Identities = 68/113 (60%), Positives = 78/113 (69%)
 Frame = +1

Query: 214 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 393
           MA+RR+V+YS L G E+ +Y+ S+ DPRF YTPKSFD++PWK                  
Sbjct: 1   MASRRNVRYSRLLGDEDNEYD-SKFDPRFDYTPKSFDKIPWKSIALALFLLLLGILLLFL 59

Query: 394 XXXXXTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIP 552
                TGHMGGDRSQAYGLL LG L FLPGFYETRIAYY+WRGA GYRF SIP
Sbjct: 60  SIFIFTGHMGGDRSQAYGLLALGALTFLPGFYETRIAYYSWRGAAGYRFGSIP 112


>ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [Cucumis sativus]
           gi|449481352|ref|XP_004156157.1| PREDICTED:
           transmembrane protein 230-like [Cucumis sativus]
          Length = 116

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
 Frame = +1

Query: 214 MATRRHVQYSPLSGKE-ERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXX 390
           MA+RR+V+YSPL+  + + D  G++ DPRF YTPK+FD++PWK                 
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 391 XXXXXXTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 558
                 TGHM G++SQAYGLL LG L FLPGFYETRIAYYAWRGA GYRFASIP Y
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116


>ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|222854011|gb|EEE91558.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  136 bits (342), Expect = 6e-30
 Identities = 65/115 (56%), Positives = 78/115 (67%)
 Frame = +1

Query: 214 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 393
           MA+RR+V+YS L   +  D  G + DPRF YTP SFDRVPWK                  
Sbjct: 1   MASRRNVRYSSLPDDDNDDKFGVQYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSL 60

Query: 394 XXXXXTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 558
                TGHMGG++SQAYGLL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 61  SFFIFTGHMGGEKSQAYGLLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|ABK94415.1| unknown [Populus trichocarpa]
          Length = 115

 Score =  135 bits (340), Expect = 1e-29
 Identities = 65/115 (56%), Positives = 77/115 (66%)
 Frame = +1

Query: 214 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 393
           MA+RR+V+YS L   +  D  G   DPRF YTP SFDRVPWK                  
Sbjct: 1   MASRRNVRYSSLPDDDNDDKFGVHYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSL 60

Query: 394 XXXXXTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 558
                TGHMGG++SQAYGLL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 61  SFFIFTGHMGGEKSQAYGLLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|AFK46465.1| unknown [Lotus japonicus]
          Length = 116

 Score =  131 bits (330), Expect = 1e-28
 Identities = 68/118 (57%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
 Frame = +1

Query: 214 MATRRHVQYSPLSGKEERDYNGSED---DPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXX 384
           MATRR V+Y+PL+  E+ DY G  +   DPRF YTPK+ DRVPWK               
Sbjct: 1   MATRR-VRYTPLATDED-DYVGDRNRPFDPRFDYTPKALDRVPWKSIALALFLLFLGTGL 58

Query: 385 XXXXXXXXTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 558
                   TGHMGG+RSQAYGLL LG L+FLPGFYETR+AYYAWRGA+GYRF++IP Y
Sbjct: 59  LFLSYFIFTGHMGGERSQAYGLLALGFLSFLPGFYETRLAYYAWRGAKGYRFSAIPDY 116


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