BLASTX nr result

ID: Coptis24_contig00010647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010647
         (2066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   298   5e-78
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              298   5e-78
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   296   2e-77
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   295   4e-77
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   291   6e-76

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  298 bits (762), Expect = 5e-78
 Identities = 147/200 (73%), Positives = 176/200 (88%)
 Frame = +1

Query: 1465 TDSDTNISPFAKAGFFSTMSFWWLNPLMKMGKEKTLEDEDIPQMREVDCAKSCYSLFMEQ 1644
            TDS  +++PFAKAGFFS+MSFWWLNPLMK G +KTLE+EDIP++RE D A+SCY  F+E+
Sbjct: 276  TDSVGDVTPFAKAGFFSSMSFWWLNPLMKRGTKKTLENEDIPKLREEDRAESCYLQFLEE 335

Query: 1645 LNIQRQIRPSTPPSILWTIIVYQWKGILISGFFALLKILTLSCGPLLLNAFIEVAEGKQA 1824
            L  Q+QI PS+ PSIL  II+  WK I ISGFFAL+KILTLS GPLLLNAFI+VAEGK+ 
Sbjct: 336  LIKQKQIEPSSQPSILRVIILCYWKDIFISGFFALVKILTLSTGPLLLNAFIKVAEGKEL 395

Query: 1825 FKHEGYVLALCLFLAKCLESLSQRQWYFRSRIVGLQVRSLLSAAIFKKQMRLSNAAKLKH 2004
            FK+EGYVLA+ LF++K +ESLSQRQWYFRSR++GL+VRSLL+AAI+KKQ+RLSNAAK+ H
Sbjct: 396  FKNEGYVLAMALFVSKNVESLSQRQWYFRSRLIGLRVRSLLTAAIYKKQLRLSNAAKMIH 455

Query: 2005 SSGEIMNYVTVDAYRIGEFP 2064
            SSGEI NYVTVDAYRIGEFP
Sbjct: 456  SSGEITNYVTVDAYRIGEFP 475



 Score =  150 bits (380), Expect = 1e-33
 Identities = 79/194 (40%), Positives = 105/194 (54%), Gaps = 1/194 (0%)
 Frame = +2

Query: 752  LKDKNMKDDLWVLFCKEPNCVGKE-CGSSFVSITDPSSCINHVXXXXXXXXXXXXXXXXX 928
            L+ K+   DLW +FC EP+C+    C S F+    PSSC NH                  
Sbjct: 47   LRGKSKMGDLWTMFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTM 106

Query: 929  XXXXXXXXIQIPIRFKRFSHLEGLSAAFNGCLGVLYLGLGIWMLREQLKRWGTALPLHWW 1108
                    + +P +F+RFS L+  SA FNGCLG++YLGLG+W+L E L++    LPLHWW
Sbjct: 107  IQRTSSKPVHVPGQFQRFSPLQISSAIFNGCLGLVYLGLGVWILEENLRKTQIVLPLHWW 166

Query: 1109 LVVLFQGVTWLFASLTVSLKARKLSKRFLRPWSILACLYAGILCVFSLINVISNKEXXXX 1288
            L+ L QG TWL   L VSL+ + L +  LR  SILA L++GI  V S+ + I  KE    
Sbjct: 167  LLPLLQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVE 226

Query: 1289 XXXXXXXXPGAVLL 1330
                    PGA+LL
Sbjct: 227  IVLNVLSLPGAILL 240


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  298 bits (762), Expect = 5e-78
 Identities = 147/200 (73%), Positives = 176/200 (88%)
 Frame = +1

Query: 1465 TDSDTNISPFAKAGFFSTMSFWWLNPLMKMGKEKTLEDEDIPQMREVDCAKSCYSLFMEQ 1644
            TDS  +++PFAKAGFFS+MSFWWLNPLMK G +KTLE+EDIP++RE D A+SCY  F+E+
Sbjct: 197  TDSVGDVTPFAKAGFFSSMSFWWLNPLMKRGTKKTLENEDIPKLREEDRAESCYLQFLEE 256

Query: 1645 LNIQRQIRPSTPPSILWTIIVYQWKGILISGFFALLKILTLSCGPLLLNAFIEVAEGKQA 1824
            L  Q+QI PS+ PSIL  II+  WK I ISGFFAL+KILTLS GPLLLNAFI+VAEGK+ 
Sbjct: 257  LIKQKQIEPSSQPSILRVIILCYWKDIFISGFFALVKILTLSTGPLLLNAFIKVAEGKEL 316

Query: 1825 FKHEGYVLALCLFLAKCLESLSQRQWYFRSRIVGLQVRSLLSAAIFKKQMRLSNAAKLKH 2004
            FK+EGYVLA+ LF++K +ESLSQRQWYFRSR++GL+VRSLL+AAI+KKQ+RLSNAAK+ H
Sbjct: 317  FKNEGYVLAMALFVSKNVESLSQRQWYFRSRLIGLRVRSLLTAAIYKKQLRLSNAAKMIH 376

Query: 2005 SSGEIMNYVTVDAYRIGEFP 2064
            SSGEI NYVTVDAYRIGEFP
Sbjct: 377  SSGEITNYVTVDAYRIGEFP 396



 Score =  106 bits (265), Expect = 2e-20
 Identities = 64/186 (34%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
 Frame = +2

Query: 776  DLWVLFCKEPNCVGKE-CGSSFVSITDPSSCINHVXXXXXXXXXXXXXXXXXXXXXXXXX 952
            DLW +FC EP+C+    C S F+    PSSC NH                          
Sbjct: 3    DLWTMFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRTSSKP 62

Query: 953  IQIPIRFKRFSHLEGLSAAFNGCLGVLYLGLGIWMLREQLKRWGTALPLHWWLVVLFQGV 1132
            + +P +F+RFS L+  SA FNGCLG++YLGLG+W+L E L++    LPLHW         
Sbjct: 63   VHVPGQFQRFSPLQISSAIFNGCLGLVYLGLGVWILEENLRKTQIVLPLHW--------- 113

Query: 1133 TWLFASLTVSLKARKLSKRFLRPWSILACLYAGILCVFSLINVISNKEXXXXXXXXXXXX 1312
                                LR  SILA L++GI  V S+ + I  KE            
Sbjct: 114  ------------------SPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLNVLSL 155

Query: 1313 PGAVLL 1330
            PGA+LL
Sbjct: 156  PGAILL 161


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  296 bits (757), Expect = 2e-77
 Identities = 146/200 (73%), Positives = 175/200 (87%)
 Frame = +1

Query: 1465 TDSDTNISPFAKAGFFSTMSFWWLNPLMKMGKEKTLEDEDIPQMREVDCAKSCYSLFMEQ 1644
            TDS  +++PFAKAGFFS+MSFWWLNPLMK G +KTLE+EDIP++RE D A+SCY  F+E+
Sbjct: 224  TDSVGDVTPFAKAGFFSSMSFWWLNPLMKRGTKKTLENEDIPKLREEDRAESCYLQFLEE 283

Query: 1645 LNIQRQIRPSTPPSILWTIIVYQWKGILISGFFALLKILTLSCGPLLLNAFIEVAEGKQA 1824
            L  Q+QI PS+ PSIL  II+  WK I ISGFFAL+KILTLS GPLLLNAFI+VAEGK+ 
Sbjct: 284  LIKQKQIEPSSQPSILRVIILCYWKDIFISGFFALVKILTLSTGPLLLNAFIKVAEGKEL 343

Query: 1825 FKHEGYVLALCLFLAKCLESLSQRQWYFRSRIVGLQVRSLLSAAIFKKQMRLSNAAKLKH 2004
            FK+EGYVLA+ LF++K +ESLSQRQWYFRSR++GL+VRSLL+AAI+KKQ+RLSNAAK+ H
Sbjct: 344  FKNEGYVLAMALFVSKNVESLSQRQWYFRSRLIGLRVRSLLTAAIYKKQLRLSNAAKMIH 403

Query: 2005 SSGEIMNYVTVDAYRIGEFP 2064
            SSGEI NYVTVD YRIGEFP
Sbjct: 404  SSGEITNYVTVDXYRIGEFP 423



 Score =  144 bits (362), Expect = 1e-31
 Identities = 76/186 (40%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
 Frame = +2

Query: 776  DLWVLFCKEPNCVGKE-CGSSFVSITDPSSCINHVXXXXXXXXXXXXXXXXXXXXXXXXX 952
            DLW  FC EP+C+    C S F+    PSSC NH                          
Sbjct: 3    DLWTXFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRTSSKP 62

Query: 953  IQIPIRFKRFSHLEGLSAAFNGCLGVLYLGLGIWMLREQLKRWGTALPLHWWLVVLFQGV 1132
            + +P +F+RFS L+  SA FNGCLG++YL LG+W+L E L++    LPLHWWL+ L QG 
Sbjct: 63   VHVPGQFQRFSPLQISSAIFNGCLGLVYLXLGVWILEENLRKTQIVLPLHWWLLPLLQGF 122

Query: 1133 TWLFASLTVSLKARKLSKRFLRPWSILACLYAGILCVFSLINVISNKEXXXXXXXXXXXX 1312
            TWL   L VSL+ + L +  LR  SILA L++GI  V S+ + I  KE            
Sbjct: 123  TWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLNVLSL 182

Query: 1313 PGAVLL 1330
            PGA+LL
Sbjct: 183  PGAILL 188


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  295 bits (754), Expect = 4e-77
 Identities = 145/199 (72%), Positives = 168/199 (84%)
 Frame = +1

Query: 1468 DSDTNISPFAKAGFFSTMSFWWLNPLMKMGKEKTLEDEDIPQMREVDCAKSCYSLFMEQL 1647
            +S   ++PFAKAGFF+ MSFWWLNPLM+ GKEKTLEDEDIP++RE + A+SCY  F+EQL
Sbjct: 169  NSVNQVTPFAKAGFFNKMSFWWLNPLMRKGKEKTLEDEDIPKLREAERAESCYMEFLEQL 228

Query: 1648 NIQRQIRPSTPPSILWTIIVYQWKGILISGFFALLKILTLSCGPLLLNAFIEVAEGKQAF 1827
            N Q+Q   S+ PS+LWTI+   WK I+ISGFFA+LKILTLS GPLLLNAFI VAEGK  F
Sbjct: 229  NKQKQAE-SSQPSLLWTIVFCHWKDIVISGFFAMLKILTLSAGPLLLNAFILVAEGKAGF 287

Query: 1828 KHEGYVLALCLFLAKCLESLSQRQWYFRSRIVGLQVRSLLSAAIFKKQMRLSNAAKLKHS 2007
            K+EGYVL L LF +K LESLSQRQWYFRSR+VGL+VRSLL+AAI+KKQ RLSN  +L HS
Sbjct: 288  KYEGYVLVLTLFFSKSLESLSQRQWYFRSRLVGLKVRSLLTAAIYKKQQRLSNVGRLMHS 347

Query: 2008 SGEIMNYVTVDAYRIGEFP 2064
             GEIMNYVTVDAYRIGEFP
Sbjct: 348  GGEIMNYVTVDAYRIGEFP 366



 Score =  105 bits (261), Expect = 6e-20
 Identities = 57/125 (45%), Positives = 75/125 (60%)
 Frame = +2

Query: 956  QIPIRFKRFSHLEGLSAAFNGCLGVLYLGLGIWMLREQLKRWGTALPLHWWLVVLFQGVT 1135
            +I  RF+ +S L+ +S   NG +G +YL LGIW+L E+L++  T LPL  WLVVLFQG T
Sbjct: 12   KITPRFRGYSSLQIVSVILNGGIGFVYLCLGIWILEEKLRKNQTVLPLRSWLVVLFQGFT 71

Query: 1136 WLFASLTVSLKARKLSKRFLRPWSILACLYAGILCVFSLINVISNKEXXXXXXXXXXXXP 1315
            WL   LT+SL  + L +  LR  SILA L AGI+C  S+ N I  +             P
Sbjct: 72   WLLVGLTISLLGKHLQRTPLRLLSILASLLAGIVCALSIYNAILGEGMLVRIALDVLSFP 131

Query: 1316 GAVLL 1330
            GA+LL
Sbjct: 132  GAILL 136


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  291 bits (744), Expect = 6e-76
 Identities = 141/199 (70%), Positives = 169/199 (84%)
 Frame = +1

Query: 1468 DSDTNISPFAKAGFFSTMSFWWLNPLMKMGKEKTLEDEDIPQMREVDCAKSCYSLFMEQL 1647
            DS   ++PF KAGFFS+MSFWWLN LMK GKEKTLEDEDIP++R+ + A+SCY +F+EQ+
Sbjct: 225  DSFVQVTPFGKAGFFSSMSFWWLNSLMKKGKEKTLEDEDIPKLRQAEQAESCYLMFLEQV 284

Query: 1648 NIQRQIRPSTPPSILWTIIVYQWKGILISGFFALLKILTLSCGPLLLNAFIEVAEGKQAF 1827
            N Q+Q + S+ PS+  TII   WK ILISGFFA+LKILTLS GPLLLN FI VAEGK +F
Sbjct: 285  NKQKQAKSSSQPSLFRTIISCHWKDILISGFFAMLKILTLSAGPLLLNNFILVAEGKASF 344

Query: 1828 KHEGYVLALCLFLAKCLESLSQRQWYFRSRIVGLQVRSLLSAAIFKKQMRLSNAAKLKHS 2007
            K+EGYVLAL LF++K LESLSQRQWYFRSR++GL+VRSLL+AAI++KQ+RLSN  +L HS
Sbjct: 345  KYEGYVLALTLFISKSLESLSQRQWYFRSRLIGLKVRSLLTAAIYRKQLRLSNTGRLMHS 404

Query: 2008 SGEIMNYVTVDAYRIGEFP 2064
              EIMNYVTVDAYRIGEFP
Sbjct: 405  GSEIMNYVTVDAYRIGEFP 423



 Score =  113 bits (283), Expect = 2e-22
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
 Frame = +2

Query: 773  DDLWVLFCKEP---NCVGKECGSSFVSITDPSSCINHVXXXXXXXXXXXXXXXXXXXXXX 943
            +DLW LFC +    +  G+  GS FV ++ PSSC+NH                       
Sbjct: 2    EDLWTLFCGDSGSSDIKGRPFGSDFVVLSQPSSCVNHSLIIFLDFLLLVLLLFISIQKSS 61

Query: 944  XXXIQIPIRFKRFSHLEGLSAAFNGCLGVLYLGLGIWMLREQLKRWGTALPLHWWLVVLF 1123
                +IP R++  S+L+  S  FNG LG +YL  G W+L E+L++  +ALPL   L++ F
Sbjct: 62   LKRDKIPPRYRGLSYLQIGSLVFNGGLGFVYLCSGAWILEEKLRKDQSALPLSRSLLLFF 121

Query: 1124 QGVTWLFASLTVSLKARKLSKRFLRPWSILACLYAGILCVFSLINVISNKEXXXXXXXXX 1303
            QG TWL  SLT+SL+ ++L +  LR  +++A + AGI+C  SL   I             
Sbjct: 122  QGFTWLLVSLTISLRGKQLPRTPLRLLAVVAFVVAGIVCALSLFAAILGDIVSVKTALDV 181

Query: 1304 XXXPGAVLL 1330
               PGA+L+
Sbjct: 182  VSFPGAILM 190


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