BLASTX nr result

ID: Coptis24_contig00010643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010643
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303360.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08
ref|XP_004158134.1| PREDICTED: inositol 2-dehydrogenase 2-like [...    65   5e-08
ref|XP_004152397.1| PREDICTED: inositol 2-dehydrogenase 2-like [...    65   5e-08
ref|XP_002530658.1| oxidoreductase, putative [Ricinus communis] ...    65   5e-08
gb|AFK33337.1| unknown [Medicago truncatula]                           64   9e-08

>ref|XP_002303360.1| predicted protein [Populus trichocarpa] gi|222840792|gb|EEE78339.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +3

Query: 1062 GTKEVVDSGTC----VVNPNMTHFRIPMDIMNRPKPHPTLVRKSLCTTVT*CKRV 1214
            G +E++DSG C    V +PNMTH+RI MDI++ PKPH  LV K LCTTV  CK+V
Sbjct: 69   GHRELLDSGLCDVVVVSSPNMTHYRILMDIISHPKPHHVLVEKPLCTTVADCKKV 123


>ref|XP_004158134.1| PREDICTED: inositol 2-dehydrogenase 2-like [Cucumis sativus]
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
 Frame = +3

Query: 1062 GTKEVVDSGTC----VVNPNMTHFRIPMDIMNRPKPHPTLVRKSLCTTVT*CKRV 1214
            G +E++DSG C    V  PNMTH++I MDI+N P+PH  LV K LCTTV  CK V
Sbjct: 69   GHQELLDSGLCDVLVVSTPNMTHYQILMDIINHPRPHHVLVEKPLCTTVAHCKEV 123


>ref|XP_004152397.1| PREDICTED: inositol 2-dehydrogenase 2-like [Cucumis sativus]
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
 Frame = +3

Query: 1062 GTKEVVDSGTC----VVNPNMTHFRIPMDIMNRPKPHPTLVRKSLCTTVT*CKRV 1214
            G +E++DSG C    V  PNMTH++I MDI+N P+PH  LV K LCTTV  CK V
Sbjct: 69   GHQELLDSGLCDVLVVSTPNMTHYQILMDIINHPRPHHVLVEKPLCTTVAHCKEV 123


>ref|XP_002530658.1| oxidoreductase, putative [Ricinus communis]
            gi|223529791|gb|EEF31727.1| oxidoreductase, putative
            [Ricinus communis]
          Length = 374

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
 Frame = +3

Query: 1062 GTKEVVDSGTC----VVNPNMTHFRIPMDIMNRPKPHPTLVRKSLCTTVT*CKRV 1214
            G +E++DSG C    V +PNMTH++I MDI+N PKPH  LV K LCTTV  C +V
Sbjct: 63   GHQELLDSGLCDAVVVSSPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCMKV 117


>gb|AFK33337.1| unknown [Medicago truncatula]
          Length = 173

 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
 Frame = +3

Query: 1062 GTKEVVDSGTC----VVNPNMTHFRIPMDIMNRPKPHPTLVRKSLCTTVT*CKRV 1214
            G KE++DSG C    V  PNMTH+ I MDI+N  KPH  LV K LCTTV+ CK V
Sbjct: 66   GHKELLDSGLCDVLVVSTPNMTHYSILMDIINHSKPHHVLVEKPLCTTVSHCKEV 120


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