BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010641
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitoch...    79   5e-13
emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]    79   5e-13
ref|XP_002867301.1| ribosomal protein L28 family protein [Arabid...    70   1e-10
ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial pre...    70   1e-10
ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitoch...    70   2e-10

>ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitochondrial [Vitis
           vinifera] gi|302142683|emb|CBI19886.3| unnamed protein
           product [Vitis vinifera]
          Length = 216

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/56 (71%), Positives = 44/56 (78%), Gaps = 5/56 (8%)
 Frame = -1

Query: 224 IDEYLLKTPSHKMDTEMGFFWKAKMEKMYKEQELRQMDV-----EDEAKFEHGFKD 72
           IDEYLLKTP HKMDTEMG FWKAK+EKMY  +EL +MDV     EDE KFE GFK+
Sbjct: 103 IDEYLLKTPYHKMDTEMGLFWKAKIEKMY--EELGEMDVVFFSPEDEVKFEQGFKE 156


>emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]
          Length = 1084

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/56 (71%), Positives = 44/56 (78%), Gaps = 5/56 (8%)
 Frame = -1

Query: 224 IDEYLLKTPSHKMDTEMGFFWKAKMEKMYKEQELRQMDV-----EDEAKFEHGFKD 72
           IDEYLLKTP HKMDTEMG FWKAK+EKMY  +EL +MDV     EDE KFE GFK+
Sbjct: 103 IDEYLLKTPYHKMDTEMGLFWKAKIEKMY--EELGEMDVVFFSPEDEVKFEQGFKE 156


>ref|XP_002867301.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313137|gb|EFH43560.1| ribosomal protein
           L28 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 212

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/56 (66%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
 Frame = -1

Query: 224 IDEYLLKTPSHKMDTEMGFFWKAKMEKMYKEQELRQMDV-----EDEAKFEHGFKD 72
           IDEYLLKTP  KMDTEMG +WK K+E+ Y   EL QM+V     EDEAKFE GFKD
Sbjct: 107 IDEYLLKTPYQKMDTEMGLYWKTKVEQRY--AELGQMEVAFFTPEDEAKFEQGFKD 160


>ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial precursor, putative
           [Ricinus communis] gi|223533093|gb|EEF34852.1| 60S
           ribosomal protein L24, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 211

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
 Frame = -1

Query: 224 IDEYLLKTPSHKMDTEMGFFWKAKMEKMYKE---QELRQMDVEDEAKFEHGFKD 72
           IDEYLLKTP  KMDT+MG FWKAK+EK+Y++   +E+     EDEAKFE G KD
Sbjct: 107 IDEYLLKTPYQKMDTDMGLFWKAKIEKLYEDLGKREIVFFPPEDEAKFEQGLKD 160


>ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Glycine
           max]
          Length = 235

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
 Frame = -1

Query: 224 IDEYLLKTPSHKMDTEMGFFWKAKMEKMYKE---QELRQMDVEDEAKFEHGFKD 72
           IDEYL+KTP HKMDTEMG  WKAK+EK+Y+E   +E+     EDEAKFE  F D
Sbjct: 107 IDEYLMKTPYHKMDTEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFND 160