BLASTX nr result

ID: Coptis24_contig00010629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010629
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300822.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_004139738.1| PREDICTED: putative nuclease HARBI1-like [Cu...   120   9e-26
emb|CAB86428.1| putative protein [Arabidopsis thaliana]               120   9e-26
ref|NP_567144.1| uncharacterized protein [Arabidopsis thaliana] ...   120   9e-26
ref|XP_003632343.1| PREDICTED: putative nuclease HARBI1-like [Vi...   120   1e-25

>ref|XP_002300822.1| predicted protein [Populus trichocarpa] gi|222842548|gb|EEE80095.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 245 REYIVGGTAYPLLPWLITPYGNKYLTGLMADFNAKHRQASELAGIAFSQLKGTWRILHKV 66
           REYIVGG  YPLLPWLITP  ++ ++G M+ FNA+H  A  LA  +F  LKG+WRIL KV
Sbjct: 267 REYIVGGVGYPLLPWLITPEVSEGISGSMSTFNARHEAARLLAVRSFMHLKGSWRILSKV 326

Query: 65  MWRPDKRKLPSIILVCCLLHN 3
           MWRPDKRKLPSIILVCCLLHN
Sbjct: 327 MWRPDKRKLPSIILVCCLLHN 347


>ref|XP_004139738.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus]
           gi|449528120|ref|XP_004171054.1| PREDICTED: putative
           nuclease HARBI1-like [Cucumis sativus]
          Length = 396

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/81 (72%), Positives = 64/81 (79%)
 Frame = -2

Query: 245 REYIVGGTAYPLLPWLITPYGNKYLTGLMADFNAKHRQASELAGIAFSQLKGTWRILHKV 66
           REY+VGG  YPLLPWLITPY N  L+ L  +FNA    A  LA  AFSQLKG+WRIL+KV
Sbjct: 260 REYLVGGVGYPLLPWLITPYENDNLSPLNFNFNAVQGAAKLLAVRAFSQLKGSWRILNKV 319

Query: 65  MWRPDKRKLPSIILVCCLLHN 3
           MWRPDKRKLPSIILVCCLL N
Sbjct: 320 MWRPDKRKLPSIILVCCLLQN 340


>emb|CAB86428.1| putative protein [Arabidopsis thaliana]
          Length = 463

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/81 (65%), Positives = 64/81 (79%)
 Frame = -2

Query: 245 REYIVGGTAYPLLPWLITPYGNKYLTGLMADFNAKHRQASELAGIAFSQLKGTWRILHKV 66
           REY+VGG +YPLLPWLITP+ + + +  M  FN +H +   +A  AF QLKG+WRIL KV
Sbjct: 297 REYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKV 356

Query: 65  MWRPDKRKLPSIILVCCLLHN 3
           MWRPD+RKLPSIILVCCLLHN
Sbjct: 357 MWRPDRRKLPSIILVCCLLHN 377


>ref|NP_567144.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13878075|gb|AAK44115.1|AF370300_1 unknown protein
           [Arabidopsis thaliana] gi|17104745|gb|AAL34261.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646938|gb|AEE80459.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/81 (65%), Positives = 64/81 (79%)
 Frame = -2

Query: 245 REYIVGGTAYPLLPWLITPYGNKYLTGLMADFNAKHRQASELAGIAFSQLKGTWRILHKV 66
           REY+VGG +YPLLPWLITP+ + + +  M  FN +H +   +A  AF QLKG+WRIL KV
Sbjct: 268 REYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKV 327

Query: 65  MWRPDKRKLPSIILVCCLLHN 3
           MWRPD+RKLPSIILVCCLLHN
Sbjct: 328 MWRPDRRKLPSIILVCCLLHN 348


>ref|XP_003632343.1| PREDICTED: putative nuclease HARBI1-like [Vitis vinifera]
          Length = 400

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/81 (70%), Positives = 60/81 (74%)
 Frame = -2

Query: 245 REYIVGGTAYPLLPWLITPYGNKYLTGLMADFNAKHRQASELAGIAFSQLKGTWRILHKV 66
           REY+VGG  YPLLPWLITP     +   M+ F   H  A  LA  AFSQLKGTWRIL KV
Sbjct: 264 REYVVGGVGYPLLPWLITPCEYNDIPSSMSGFKTNHEAARSLAVRAFSQLKGTWRILSKV 323

Query: 65  MWRPDKRKLPSIILVCCLLHN 3
           MWRPDKRKLPSIILVCCLLHN
Sbjct: 324 MWRPDKRKLPSIILVCCLLHN 344


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