BLASTX nr result

ID: Coptis24_contig00010627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010627
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein ...   231   2e-58
ref|XP_002522826.1| Oxygen-evolving enhancer protein 3-1, chloro...   219   8e-55
ref|XP_002319801.1| predicted protein [Populus trichocarpa] gi|2...   210   3e-52
ref|XP_004151964.1| PREDICTED: psbQ-like protein 2, chloroplasti...   196   4e-48
ref|XP_003540422.1| PREDICTED: oxygen-evolving enhancer protein ...   195   1e-47

>ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic
           [Vitis vinifera] gi|147768263|emb|CAN78127.1|
           hypothetical protein VITISV_028757 [Vitis vinifera]
           gi|302143202|emb|CBI20497.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  231 bits (588), Expect = 2e-58
 Identities = 125/233 (53%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -1

Query: 843 MACLANLNCISPT--SSLKVKSSKVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSR 670
           MA LANL+  S T  S  K++   +  T +R+ ++G    + EQ QE           S 
Sbjct: 1   MAHLANLHGASETLPSIFKLRGD-LRRTRKRVTIIGFLCKKAEQIQEQ----------SF 49

Query: 669 QTTRRVVIGLAAVALSLQSGIEKALAEDNGYWNTGPLTVPLVSSKIANEETGTRTFLKKG 490
           Q TRR  +GL+++A+   SGI  ALAEDNGYW TGPL VP V + I N+ETGTR+FLKKG
Sbjct: 50  QATRRSALGLSSIAILGNSGIGPALAEDNGYWLTGPLPVPTVDNDIVNKETGTRSFLKKG 109

Query: 489 IFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWHYVRMYLRLKSSIMYYDFDTVISASP 310
           +++A++G KG   RLKKYAFDL+ +ED++ +DAW+Y   YLRLKS+ MYYDFD +ISA P
Sbjct: 110 LYIADVGTKGRMLRLKKYAFDLIALEDLMDKDAWNYFTKYLRLKSTFMYYDFDKLISAVP 169

Query: 309 VNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVMETRMA 151
           V++K PLTDLA RLFD VEKLE AVK+  + Q ES Y+DT  +LQEVM+ RMA
Sbjct: 170 VDEKQPLTDLANRLFDCVEKLEDAVKIRDISQTESRYKDTKTVLQEVMD-RMA 221


>ref|XP_002522826.1| Oxygen-evolving enhancer protein 3-1, chloroplast precursor,
           putative [Ricinus communis] gi|223537910|gb|EEF39524.1|
           Oxygen-evolving enhancer protein 3-1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 224

 Score =  219 bits (557), Expect = 8e-55
 Identities = 119/228 (52%), Positives = 154/228 (67%), Gaps = 1/228 (0%)
 Frame = -1

Query: 843 MACLANLNCISPTSSLKVKSSKVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSRQT 664
           MA LANLN IS       K +  + T RR  ++GL   +    +EHP Q          T
Sbjct: 1   MAHLANLNGISENCPAIPKITNKQRTKRRANIIGLLGKKQVNYEEHPLQ----------T 50

Query: 663 TRRVVIGLAAVALSLQSGIEKALAEDNGYWNTG-PLTVPLVSSKIANEETGTRTFLKKGI 487
           TRR+ +GLA+VAL   SG   + AEDNG+W    PL VP V +K+ANE+TGTR+FLKKGI
Sbjct: 51  TRRLALGLASVALIGNSGNGVSHAEDNGFWQLDFPLIVPSVDNKLANEKTGTRSFLKKGI 110

Query: 486 FVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWHYVRMYLRLKSSIMYYDFDTVISASPV 307
           ++A+IG KGS YR++K  FDL+ +ED++G D  +YVR YLRLKS+ MYYDFD VISA+PV
Sbjct: 111 YMADIGVKGSMYRIRKCGFDLLALEDLIGPDTLNYVRKYLRLKSTFMYYDFDKVISAAPV 170

Query: 306 NDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 163
           +DK  LTDLA +LFD+ E+LE A +  +LP+ E  YQ T  ILQEVM+
Sbjct: 171 SDKQSLTDLANKLFDNFEELEDASRRKNLPETELSYQGTKVILQEVMD 218


>ref|XP_002319801.1| predicted protein [Populus trichocarpa] gi|222858177|gb|EEE95724.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  210 bits (535), Expect = 3e-52
 Identities = 114/227 (50%), Positives = 152/227 (66%)
 Frame = -1

Query: 843 MACLANLNCISPTSSLKVKSSKVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSRQT 664
           MA L NLN ++ T     K   V+   RR+ + GL   +       P  L  N+F   QT
Sbjct: 1   MAHLTNLNGVTETLPAIPKLINVQKPQRRMKITGLLGKK-------PVNLQGNSF---QT 50

Query: 663 TRRVVIGLAAVALSLQSGIEKALAEDNGYWNTGPLTVPLVSSKIANEETGTRTFLKKGIF 484
           TRR+ +GLA++AL        +LAEDN +    PL VP   +K+ANEETGTR+FLKKGI+
Sbjct: 51  TRRLALGLASIALIGNPSTGVSLAEDNWWARDIPLPVPSAENKLANEETGTRSFLKKGIY 110

Query: 483 VANIGPKGSAYRLKKYAFDLMGMEDILGQDAWHYVRMYLRLKSSIMYYDFDTVISASPVN 304
           +AN+G +GSA R+K+YAFDL+ +ED++G D  +YVR YLR+KS+ MYYD D +ISA PV+
Sbjct: 111 MANVGLQGSARRVKRYAFDLLALEDLIGPDTLNYVRKYLRIKSTFMYYDLDRIISAVPVD 170

Query: 303 DKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 163
           DK PLTDLA RLFD+ EKLE A +  +L   +S Y+DT A+LQEVM+
Sbjct: 171 DKQPLTDLANRLFDNFEKLEDASRRKNLSDTKSSYRDTKALLQEVMQ 217


>ref|XP_004151964.1| PREDICTED: psbQ-like protein 2, chloroplastic-like [Cucumis
           sativus] gi|449526650|ref|XP_004170326.1| PREDICTED:
           psbQ-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 215

 Score =  196 bits (499), Expect = 4e-48
 Identities = 115/231 (49%), Positives = 146/231 (63%)
 Frame = -1

Query: 843 MACLANLNCISPTSSLKVKSSKVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSRQT 664
           MA LANLN      S      K++N  +RL + G    +T+ S  H   L          
Sbjct: 1   MARLANLN---GKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSS-HQISL---------- 46

Query: 663 TRRVVIGLAAVALSLQSGIEKALAEDNGYWNTGPLTVPLVSSKIANEETGTRTFLKKGIF 484
           TRR+ +  + V+++L       +A  N YW  GPL VP V + I NE+TGTR+FLK GI+
Sbjct: 47  TRRLAL-TSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIY 105

Query: 483 VANIGPKGSAYRLKKYAFDLMGMEDILGQDAWHYVRMYLRLKSSIMYYDFDTVISASPVN 304
           +ANIG KG  YRLKKYAFDL+ M D++G+D  +YVR YLRLKS+ MYYDFD VISA+  +
Sbjct: 106 IANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADD 165

Query: 303 DKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVMETRMA 151
           +K PL DLA RLFD+ EKLE A K  +L + ES YQ TT ILQEVM+ RMA
Sbjct: 166 EKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMD-RMA 215


>ref|XP_003540422.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic-like
           [Glycine max]
          Length = 250

 Score =  195 bits (495), Expect = 1e-47
 Identities = 96/181 (53%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = -1

Query: 702 AQLPTNNFVSRQTTRRVVIGLAAVALSLQSGIEKALAEDNGYW-NTGPLTVPLVSSKIAN 526
           AQ   +    + T R   +GLA V L+ Q   + +LA+DNG+W    PL  P V++ IAN
Sbjct: 61  AQKEASECQVQATRRAAALGLATVVLTWQFNDKVSLAKDNGFWYEDHPLPGPTVTNNIAN 120

Query: 525 EETGTRTFLKKGIFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWHYVRMYLRLKSSIM 346
           E+TGTR+FLK+G+++ANIG KGS +R+KKYAFDL+ M D++ +D  +YVR YLRLKS+ M
Sbjct: 121 EKTGTRSFLKRGLYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFM 180

Query: 345 YYDFDTVISASPVNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVM 166
           YYDFD VISA PV+DK  LTD+A +LFD+ E+LE A +  SLP+ +SCYQ+T  +L+EVM
Sbjct: 181 YYDFDKVISAIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVM 240

Query: 165 E 163
           +
Sbjct: 241 D 241


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