BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010624
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   145   3e-33
ref|XP_003607688.1| Pentatricopeptide repeat-containing protein ...   144   7e-33

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 7/156 (4%)
 Frame = +1

Query: 1   KTALEVFGKLGRESGVKDYNAFVARCVQDARTSQDDEDSLVHIQNAYLLIREMNEQGFQV 180
           +  ++VFGKLGRE+GVK+Y A +  C++ ARTS D+E SL  I  A+ L  EM EQGF +
Sbjct: 155 EATIQVFGKLGRETGVKEYKALLGICIEKARTSDDEEASLEQIYKAFQLFEEMKEQGFHI 214

Query: 181 DEKTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHEDKVQELC 360
           +E+T+G    YLIDM M+EEFHFF  +I + +     RLGYYEMLLW+RV++E+K+QELC
Sbjct: 215 EEETYGPFFMYLIDMGMIEEFHFFHGVITDENSRSLSRLGYYEMLLWVRVNNEEKIQELC 274

Query: 361 KSIVIDADG-------DGFQLAENYLLALCEADRKK 447
             I  D DG       D   +AENY+LALCE+ RK+
Sbjct: 275 NGIAAD-DGADKPNLTDTVYIAENYVLALCESGRKE 309


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/146 (52%), Positives = 106/146 (72%)
 Frame = +1

Query: 10  LEVFGKLGRESGVKDYNAFVARCVQDARTSQDDEDSLVHIQNAYLLIREMNEQGFQVDEK 189
           LEVFGKLGRE+GVK+YNA V  C++ A+ S+D E  L  I   Y L + M EQGF ++++
Sbjct: 230 LEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDE 289

Query: 190 TFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHEDKVQELCKSI 369
           T+G +L+ LIDM+M+EEF+FF E IK+G+     RLGYY+ML +I+++ E+KVQELC   
Sbjct: 290 TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRA 349

Query: 370 VIDADGDGFQLAENYLLALCEADRKK 447
            +D   D F L ENYLLALC +++KK
Sbjct: 350 TVDDGVDKFSLQENYLLALCGSEQKK 375


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/146 (50%), Positives = 104/146 (71%)
 Frame = +1

Query: 7   ALEVFGKLGRESGVKDYNAFVARCVQDARTSQDDEDSLVHIQNAYLLIREMNEQGFQVDE 186
           A+EVFGKLGRE+G+K++NA + + ++  R + D+  ++ HI     L + M EQGF ++E
Sbjct: 98  AMEVFGKLGRETGLKEFNALMKKYIEQCRETDDESVAMKHISAVLQLFKSMKEQGFSIEE 157

Query: 187 KTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHEDKVQELCKS 366
           +T+G  L  LID  MVEEFHFF ++IK+ + + N RLGYY+MLL+I V+ E+K+QELC  
Sbjct: 158 ETYGPFLILLIDKGMVEEFHFFSDIIKDTNPSKNARLGYYDMLLYIGVNDEEKIQELCNY 217

Query: 367 IVIDADGDGFQLAENYLLALCEADRK 444
           I ID   +   L ENYLLALCE+D+K
Sbjct: 218 ICIDDGDNNISLRENYLLALCESDQK 243


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/145 (51%), Positives = 99/145 (68%)
 Frame = +1

Query: 10  LEVFGKLGRESGVKDYNAFVARCVQDARTSQDDEDSLVHIQNAYLLIREMNEQGFQVDEK 189
           LE+F KLGRE+GVK+YNA +   ++ AR S D + +L HI  A+  ++ M E+GF++DE+
Sbjct: 193 LELFSKLGRETGVKEYNALIKILIEKARASDDKDVALKHIIVAFEFLKLMKEEGFRIDEE 252

Query: 190 TFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHEDKVQELCKSI 369
           T+   L YLIDM MV EF  F E I+    +   RLGYYEMLL IRV++E+K++ELC  I
Sbjct: 253 TYSPFLMYLIDMGMVTEFGSFCEAIEENDSSSLARLGYYEMLLCIRVNNEEKIRELCSYI 312

Query: 370 VIDADGDGFQLAENYLLALCEADRK 444
             +   + F L ENYLLALCE DRK
Sbjct: 313 ANNNLNETFDLLENYLLALCERDRK 337


>ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508743|gb|AES89885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/147 (44%), Positives = 101/147 (68%)
 Frame = +1

Query: 4   TALEVFGKLGRESGVKDYNAFVARCVQDARTSQDDEDSLVHIQNAYLLIREMNEQGFQVD 183
           T ++VFG LGRE+GVK+YN  +  C++  R + D+   +  +   Y L++ M E GFQ++
Sbjct: 154 TTVDVFGYLGRETGVKEYNGLIKLCIKKVRETNDENVCIEEMNKIYNLLKLMRECGFQIE 213

Query: 184 EKTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHEDKVQELCK 363
           E+T+  L  Y+IDM  V+EF  F ++IK G+ +   RLGYYEMLLW+RV++E+ ++++C+
Sbjct: 214 EQTYRPLFEYIIDMGFVQEFELFYDVIKAGNPSSISRLGYYEMLLWMRVNNEEMIRDICE 273

Query: 364 SIVIDADGDGFQLAENYLLALCEADRK 444
            I ++   D   L E+YLLALCE+DRK
Sbjct: 274 YITVEESKDTSALRESYLLALCESDRK 300