BLASTX nr result

ID: Coptis24_contig00010609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010609
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   216   5e-54
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|2...   203   6e-50
ref|XP_002333656.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-48

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  216 bits (551), Expect = 5e-54
 Identities = 130/305 (42%), Positives = 174/305 (57%), Gaps = 3/305 (0%)
 Frame = -1

Query: 950  LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLITSNQV 771
            LDGCFIIELFL+ +    R +DDPIFN + +L+ L+RDL+LLENQ+PFF+LE L    + 
Sbjct: 134  LDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLHRDLILLENQLPFFVLETLFNLIEN 193

Query: 770  DLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNALLPPHVERNMSQDIR 591
                 PS  + E    FF  +    + +R       HLLDL+R   +PP   ++ S+   
Sbjct: 194  TDQEGPSTSVLELTYVFFKFLGLQEVLIRDSQPDVKHLLDLLRLWFVPPSSTKSTSKS-- 251

Query: 590  NLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLRNLIAFEQC 411
              +LI    +L + G+                NGVLEIPPL I+D T+ LL NLIAFEQC
Sbjct: 252  KFELIRSVTELHEAGVKFRMGTVSCLMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQC 311

Query: 410  HIGCTNEF-TSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLCIEV--NL 240
                T  + T Y  LM+ LI++  DV +L  +GII++ LG +E V  +  KL  EV  N 
Sbjct: 312  CNRFTPHYITDYVILMEYLINSPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNS 371

Query: 239  DYEFYFSELCEQVNNYCKMKWHRWRADLRRDYFHNPWAWLSVXXXXXXXIFTFLQTVFSI 60
            D +F FS LC  VN Y K +WH WRA LRRDYF+NPWA +S         FT +QTV S+
Sbjct: 372  D-KFQFSNLCRDVNKYHKTRWHIWRATLRRDYFNNPWAIISFIGAVLLLFFTLIQTVCSL 430

Query: 59   VTYVK 45
            ++  K
Sbjct: 431  LSLKK 435


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  215 bits (547), Expect = 1e-53
 Identities = 126/301 (41%), Positives = 167/301 (55%), Gaps = 2/301 (0%)
 Frame = -1

Query: 947  DGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLITSNQVD 768
            DGCFI+ELFLR+  +D ++  DPIF TSWM+S+L RDL LLENQIPFF+L  L   + V 
Sbjct: 132  DGCFILELFLRFSSDDAKRQYDPIFTTSWMISTLQRDLALLENQIPFFVLTELY-KHIVR 190

Query: 767  LHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNN--HLLDLVRNALLPPHVERNMSQDI 594
                    L E ALRFF   +     +       N  HLL L+  + LP  +  +     
Sbjct: 191  HTATDQPRLVELALRFFRPELNTNEGIGAVISGGNFCHLLGLLHTSYLPSSLRVDQRGGA 250

Query: 593  RNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLRNLIAFEQ 414
               KL+ CA +L   GI                NGV +IPPL+I D T+ L RNLIAFEQ
Sbjct: 251  GPWKLLSCATELCAAGIKFQKDTTKHQLDLCFENGVFKIPPLQIHDSTDSLFRNLIAFEQ 310

Query: 413  CHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLCIEVNLDY 234
               GC    TSYA LMD L+   +DVE+L    II + LG  EDV  + N +C +V +  
Sbjct: 311  SVQGCRQYMTSYALLMDRLVDTSSDVELLAKKRIIQNDLGGYEDVTDLFNNICKQV-VVR 369

Query: 233  EFYFSELCEQVNNYCKMKWHRWRADLRRDYFHNPWAWLSVXXXXXXXIFTFLQTVFSIVT 54
            EF F++LCEQV+ Y    WH ++A L++DYF NPW  +S          T LQT++S+++
Sbjct: 370  EFNFTQLCEQVDAYYNKSWHGYKASLKQDYFKNPWTIISFIAAIVLLSLTTLQTIYSVIS 429

Query: 53   Y 51
            Y
Sbjct: 430  Y 430


>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  208 bits (529), Expect = 2e-51
 Identities = 124/310 (40%), Positives = 168/310 (54%), Gaps = 8/310 (2%)
 Frame = -1

Query: 950  LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLI----- 786
            +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L      
Sbjct: 128  VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWLFKLTVK 187

Query: 785  ---TSNQVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNALLPPHVE 615
                   +   P+ +    +S+L    G + +  ++ P      HLL L+ N  LP    
Sbjct: 188  PSAIGQSLPTLPDLAFDFFKSSLYINRGTLAVSRRIVP------HLLGLIHNCYLPSSSR 241

Query: 614  RNMSQDIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLR 435
             N  +     + I C+  L + GI                NGV +IPPL+I D T  L +
Sbjct: 242  PN-PRGRGGWEFIHCSSVLLEAGIEFERDTTSSLFDLKFENGVFKIPPLRIHDSTVSLFQ 300

Query: 434  NLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLC 255
            NLIA+EQ   G     TSY  LMD LI   NDVE+L    II++  G  EDV    N +C
Sbjct: 301  NLIAYEQRFHGGQQYITSYFLLMDRLIDTPNDVELLVQKRIIENDFGGWEDVSAFFNSIC 360

Query: 254  IEVNLDYEFYFSELCEQVNNYCKMKWHRWRADLRRDYFHNPWAWLSVXXXXXXXIFTFLQ 75
             ++ L  +FY++ LCE VN Y   +W+R++AD RRD+  NPWA +S+        FT LQ
Sbjct: 361  KQIVLQ-DFYYAGLCEDVNAYYNKQWYRYKADFRRDHCKNPWAIISLVAGFVLLGFTALQ 419

Query: 74   TVFSIVTYVK 45
            TV+S++ Y K
Sbjct: 420  TVYSVLAYYK 429


>ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|222858301|gb|EEE95848.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  203 bits (516), Expect = 6e-50
 Identities = 120/310 (38%), Positives = 168/310 (54%), Gaps = 8/310 (2%)
 Frame = -1

Query: 950 LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLI----- 786
           +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L      
Sbjct: 59  VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWLFKLTVK 118

Query: 785 ---TSNQVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNALLPPHVE 615
                  +   P+ +    +S+L    G + +  ++ P      HLL L+ N  LP    
Sbjct: 119 PSAIGQSLPTLPDLAFDFFKSSLYINIGTLAVSRRIVP------HLLALIHNCYLPSSSR 172

Query: 614 RNMSQDIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLR 435
            N  +     + I C+  L + GI                NGV +IPPL+I D T  L +
Sbjct: 173 PN-PRGRGGWEFIHCSSVLLEAGIKFERGTTSSLFDLKFENGVFKIPPLRIHDSTVSLFQ 231

Query: 434 NLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLC 255
           NLIA+EQ   G     TSY  LMD LI   +DVE+L    II++  G  EDV    N +C
Sbjct: 232 NLIAYEQRFHGSQQYITSYFLLMDRLIDTPSDVELLVQKRIIENDFGGWEDVSAFFNSIC 291

Query: 254 IEVNLDYEFYFSELCEQVNNYCKMKWHRWRADLRRDYFHNPWAWLSVXXXXXXXIFTFLQ 75
            ++ L  +FY++ +CE VN Y   +W++++AD R+D+  NPWA +S+        FT LQ
Sbjct: 292 KQIVLQ-DFYYTGICEDVNAYYNTQWYKYKADFRKDHCKNPWAIISLVAGFVLLSFTALQ 350

Query: 74  TVFSIVTYVK 45
           TV+S++ Y K
Sbjct: 351 TVYSVLAYYK 360


>ref|XP_002333656.1| predicted protein [Populus trichocarpa] gi|222837953|gb|EEE76318.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  199 bits (505), Expect = 1e-48
 Identities = 122/310 (39%), Positives = 165/310 (53%), Gaps = 8/310 (2%)
 Frame = -1

Query: 950 LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLI----- 786
           +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L      
Sbjct: 4   VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWLFKFTVK 63

Query: 785 ---TSNQVDLHPNPSKYLTESALRFFSGMMPIRLQMRPRSLSNNHLLDLVRNALLPPHVE 615
                  +   P  +    +S+L    G + +  ++ P      HLL L+ N  L P   
Sbjct: 64  PSAIGQSLPTLPELAFDFFKSSLYINRGTLAVSRRIVP------HLLGLIHNCYL-PFSS 116

Query: 614 RNMSQDIRNLKLIPCAMKLQQFGIXXXXXXXXXXXXXXXXNGVLEIPPLKIQDVTEPLLR 435
           R   +     + I  +  L Q GI                NGV +IPPL+I D T  L +
Sbjct: 117 RPNPRGRGGWEFIHYSSVLLQAGIEFERDTTSSLFDLKFENGVFKIPPLRIHDSTVSLFQ 176

Query: 434 NLIAFEQCHIGCTNEFTSYAFLMDSLISNKNDVEILQNHGIIDHWLGSDEDVMGILNKLC 255
           NLIA+EQ   G     TSY  LMD LI   NDVE+L    II++  G  ED+    N +C
Sbjct: 177 NLIAYEQRFHGGQQYITSYFLLMDRLIDTPNDVELLVQRRIIENDFGGWEDISAFFNSIC 236

Query: 254 IEVNLDYEFYFSELCEQVNNYCKMKWHRWRADLRRDYFHNPWAWLSVXXXXXXXIFTFLQ 75
            ++ L  +FY++ LCE VN Y   + +R++AD RRD+  NPWA +S+        FT LQ
Sbjct: 237 KQIVLQ-DFYYAGLCEDVNAYYNKQCYRYKADFRRDHCKNPWAIISLVAGFVLLGFTALQ 295

Query: 74  TVFSIVTYVK 45
           TV+S++ Y K
Sbjct: 296 TVYSVLAYYK 305


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